Gene annotation
Transcriptome id Sobic.008G165200.3,Sobic.008G165200.4,Sobic.008G165200.1,Sobic.008G165200.2
Synonym Sb08g021120
Functional annotation OsFBX358 - F-box domain containing protein, expressed
UniProt A0A1B6PE64 , A0A1Z5R811
Pfam PF12937
Panther DB PTHR33207 PTHR33207:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36870.1,LOC_Os07g36840.1 : OsFBX252 - F-box domain containing protein, expressed,OsFBX251 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT65828 , PNT65827 , KQJ93217
Barley HORVU6Hr1G018740.2 , HORVU6Hr1G018740.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G212600 a_IG002N01.7, putative, expressed -
2 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.010G020900 OsFBX291 - F-box domain containing protein, expressed -
4 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
5 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
7 Sobic.009G024900 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
8 Sobic.001G079900 expressed protein -
9 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
10 Sobic.001G425200 expressed protein -
11 Sobic.004G077900 YIF1B, putative, expressed -
12 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
13 Sobic.008G143800 cyclin, putative, expressed K06627: cyclin-A
14 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
15 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
16 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
17 Sobic.003G131100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
18 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
19 Sobic.001G369800 monocopper oxidase, putative, expressed -
20 Sobic.002G430900 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic008G165200 Sobic008G165200 Sobic001G212600 Sobic001G212600 Sobic008G165200--Sobic001G212600 Sobic007G031300 Sobic007G031300 Sobic008G165200--Sobic007G031300 Sobic010G020900 Sobic010G020900 Sobic008G165200--Sobic010G020900 Sobic008G169400 Sobic008G169400 Sobic008G165200--Sobic008G169400 Sobic003G153900 Sobic003G153900 Sobic008G165200--Sobic003G153900 Sobic001G296800 Sobic001G296800 Sobic008G165200--Sobic001G296800 Sobic009G024900 Sobic009G024900 Sobic008G165200--Sobic009G024900 Sobic001G079900 Sobic001G079900 Sobic008G165200--Sobic001G079900 Sobic003G351900 Sobic003G351900 Sobic008G165200--Sobic003G351900 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic001G212600--Sobic008G165200 Sobic001G369800 Sobic001G369800 Sobic001G212600--Sobic001G369800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic007G031300--Sobic008G169400 Sobic001G211500 Sobic001G211500 Sobic007G031300--Sobic001G211500 Sobic004G129500 Sobic004G129500 Sobic007G031300--Sobic004G129500 Sobic007G031300--Sobic001G296800 Sobic002G430900 Sobic002G430900 Sobic007G031300--Sobic002G430900 Sobic003G028400 Sobic003G028400 Sobic007G031300--Sobic003G028400 Sobic001G210000 Sobic001G210000 Sobic007G031300--Sobic001G210000 Sobic007G031300--Sobic003G153900 Sobic003G212600 Sobic003G212600 Sobic007G031300--Sobic003G212600 Sobic010G020900--Sobic001G212600 Sobic010G020900--Sobic008G165200 Sobic001G540700 Sobic001G540700 Sobic010G020900--Sobic001G540700 Sobic004G207000 Sobic004G207000 Sobic010G020900--Sobic004G207000 Sobic010G020900--Sobic001G369800 Sobic010G020900--Sobic005G062600 Sobic010G020900--Sobic003G153900 Sobic002G302600 Sobic002G302600 Sobic010G020900--Sobic002G302600 Sobic001G425200 Sobic001G425200 Sobic010G020900--Sobic001G425200 Sobic008G169400--Sobic001G079900 Sobic008G169400--Sobic003G153900 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic003G397100 Sobic003G397100 Sobic008G169400--Sobic003G397100 Sobic003G153900--Sobic003G351900 Sobic003G153900--Sobic008G169400 Sobic002G021200 Sobic002G021200 Sobic003G153900--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic003G153900--Sobic006G281900 Sobic003G153900--Sobic001G079900 Sobic003G153900--Sobic002G370400 Sobic003G153900--Sobic001G369800 Sobic009G212100 Sobic009G212100 Sobic003G153900--Sobic009G212100 Sobic006G008300 Sobic006G008300 Sobic003G153900--Sobic006G008300 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic001G296800--Sobic002G370400 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic009G024900--Sobic009G158900 Sobic003G336900 Sobic003G336900 Sobic009G024900--Sobic003G336900 Sobic002G390800 Sobic002G390800 Sobic009G024900--Sobic002G390800 Sobic002G173400 Sobic002G173400 Sobic009G024900--Sobic002G173400 Sobic008G131900 Sobic008G131900 Sobic009G024900--Sobic008G131900 Sobic009G131200 Sobic009G131200 Sobic009G024900--Sobic009G131200 Sobic003G285700 Sobic003G285700 Sobic009G024900--Sobic003G285700 Sobic001G327100 Sobic001G327100 Sobic009G024900--Sobic001G327100 Sobic003G045000 Sobic003G045000 Sobic009G024900--Sobic003G045000 Sobic005G032600 Sobic005G032600 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic001G079900--Sobic005G062600 Sobic002G050700 Sobic002G050700 Sobic001G079900--Sobic002G050700 Sobic001G079900--Sobic003G351900 Sobic001G493900 Sobic001G493900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic002G027600 Sobic002G027600 Sobic001G079900--Sobic002G027600 Sobic001G079900--Sobic009G141700 Sobic006G142500 Sobic006G142500 Sobic003G351900--Sobic006G142500 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic003G351900--Sobic002G027600 Sobic003G351900--Sobic003G153900 Sobic003G351900--Sobic001G212600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200
Octagon: transcription factors


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