Gene annotation
Transcriptome id Sobic.010G020900.1
Synonym
Functional annotation OsFBX291 - F-box domain containing protein, expressed
UniProt A0A1W0VR64
Pfam PF00646
Panther DB PTHR33110 PTHR33110:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G25290 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os01g34630.1 : retrotransposon protein, putative, Ty1-copia subclass, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G212600 a_IG002N01.7, putative, expressed -
2 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
3 Sobic.001G540700 expressed protein -
4 Sobic.004G207000 fasciated ear2, putative, expressed -
5 Sobic.001G369800 monocopper oxidase, putative, expressed -
6 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
7 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
9 Sobic.001G425200 expressed protein -
10 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
11 Sobic.007G031300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
12 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
13 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
14 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
15 Sobic.001G079900 expressed protein -
16 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
17 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
18 Sobic.002G253900 growth regulator related protein, putative, expressed -
19 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
20 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic010G020900 Sobic010G020900 Sobic001G212600 Sobic001G212600 Sobic010G020900--Sobic001G212600 Sobic008G165200 Sobic008G165200 Sobic010G020900--Sobic008G165200 Sobic001G540700 Sobic001G540700 Sobic010G020900--Sobic001G540700 Sobic004G207000 Sobic004G207000 Sobic010G020900--Sobic004G207000 Sobic001G369800 Sobic001G369800 Sobic010G020900--Sobic001G369800 Sobic005G062600 Sobic005G062600 Sobic010G020900--Sobic005G062600 Sobic003G153900 Sobic003G153900 Sobic010G020900--Sobic003G153900 Sobic002G302600 Sobic002G302600 Sobic010G020900--Sobic002G302600 Sobic001G425200 Sobic001G425200 Sobic010G020900--Sobic001G425200 Sobic003G351900 Sobic003G351900 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic001G212600--Sobic008G165200 Sobic001G212600--Sobic001G369800 Sobic001G296800 Sobic001G296800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic008G165200--Sobic001G212600 Sobic007G031300 Sobic007G031300 Sobic008G165200--Sobic007G031300 Sobic008G165200--Sobic010G020900 Sobic008G169400 Sobic008G169400 Sobic008G165200--Sobic008G169400 Sobic008G165200--Sobic003G153900 Sobic008G165200--Sobic001G296800 Sobic009G024900 Sobic009G024900 Sobic008G165200--Sobic009G024900 Sobic001G079900 Sobic001G079900 Sobic008G165200--Sobic001G079900 Sobic008G165200--Sobic003G351900 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic006G272800 Sobic006G272800 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic006G022400 Sobic006G022400 Sobic004G207000--Sobic006G022400 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic005G032600 Sobic005G032600 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic001G369800--Sobic002G284100 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic001G369800--Sobic003G351900 Sobic001G369800--Sobic001G212600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic003G153900--Sobic003G351900 Sobic003G153900--Sobic008G169400 Sobic002G021200 Sobic002G021200 Sobic003G153900--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic003G153900--Sobic006G281900 Sobic003G153900--Sobic001G079900 Sobic002G370400 Sobic002G370400 Sobic003G153900--Sobic002G370400 Sobic003G153900--Sobic001G369800 Sobic003G153900--Sobic009G212100 Sobic006G008300 Sobic006G008300 Sobic003G153900--Sobic006G008300 Sobic002G302600--Sobic001G540700 Sobic002G302600--Sobic004G207000 Sobic002G302600--Sobic006G272800 Sobic001G468000 Sobic001G468000 Sobic002G302600--Sobic001G468000 Sobic002G302600--Sobic002G284100 Sobic006G126600 Sobic006G126600 Sobic002G302600--Sobic006G126600 Sobic002G302600--Sobic009G006900 Sobic002G302600--Sobic009G031500 Sobic002G302600--Sobic007G197100 Sobic001G425200--Sobic003G411700 Sobic004G041100 Sobic004G041100 Sobic001G425200--Sobic004G041100 Sobic010G103500 Sobic010G103500 Sobic001G425200--Sobic010G103500 Sobic001G425200--Sobic001G212600 Sobic002G271400 Sobic002G271400 Sobic001G425200--Sobic002G271400 Sobic004G306100 Sobic004G306100 Sobic001G425200--Sobic004G306100 Sobic003G336900 Sobic003G336900 Sobic001G425200--Sobic003G336900 Sobic005G160200 Sobic005G160200 Sobic001G425200--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic001G425200--Sobic003G298900
Octagon: transcription factors


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