Gene annotation
Transcriptome id Sobic.001G540700.1
Synonym Sb01g050295
Functional annotation expressed protein
UniProt C5WMT2
Pfam PF12043
Panther DB PTHR31390 PTHR31390:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11450 : Protein of unknown function (DUF3527)
RAP-DB (Rice) LOC_Os03g01550.1 : expressed protein
MaizeGDB (Corn) Zm00025a000133
Brachypodium KQK24110 , KQK24102
Barley -
Wheat TraesCSU02G139300
Populus -


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cDNA sequences
Sobic.001G540700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
2 Sobic.007G197100 expressed protein -
3 Sobic.004G207000 fasciated ear2, putative, expressed -
4 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
5 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
6 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
7 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.001G369800 monocopper oxidase, putative, expressed -
9 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
13 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
14 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
16 Sobic.003G283600 HVA22, putative, expressed -
17 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
18 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
19 Sobic.006G142500 protein kinase, putative, expressed -
20 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -


Gene co-expression network
sample Sobic001G540700 Sobic001G540700 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic004G207000 Sobic004G207000 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic006G272800 Sobic006G272800 Sobic001G540700--Sobic006G272800 Sobic001G487200 Sobic001G487200 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic002G284100--Sobic006G142500 Sobic002G366000 Sobic002G366000 Sobic007G197100--Sobic002G366000 Sobic007G197100--Sobic001G540700 Sobic009G254000 Sobic009G254000 Sobic007G197100--Sobic009G254000 Sobic005G032600 Sobic005G032600 Sobic007G197100--Sobic005G032600 Sobic009G005700 Sobic009G005700 Sobic007G197100--Sobic009G005700 Sobic002G315500 Sobic002G315500 Sobic007G197100--Sobic002G315500 Sobic007G197100--Sobic004G207000 Sobic001G470200 Sobic001G470200 Sobic007G197100--Sobic001G470200 Sobic007G197100--Sobic006G272800 Sobic006G022400 Sobic006G022400 Sobic004G207000--Sobic006G022400 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic004G315700--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic004G315700--Sobic003G345000 Sobic004G315700--Sobic001G540700 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic002G006100 Sobic002G006100 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G369800--Sobic002G284100 Sobic001G369800--Sobic001G487200 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic001G369800--Sobic006G218900 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic003G345000--Sobic003G283600 Sobic003G345000--Sobic004G315700 Sobic003G345000--Sobic001G540700 Sobic003G345000--Sobic006G218900 Sobic003G345000--Sobic003G420300 Sobic003G345000--Sobic007G084200 Sobic009G225500 Sobic009G225500 Sobic003G345000--Sobic009G225500 Sobic003G345000--Sobic009G212100 Sobic003G292700 Sobic003G292700 Sobic003G345000--Sobic003G292700
Octagon: transcription factors


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