Gene annotation
Transcriptome id Sobic.003G345000.1
Synonym Sb03g038870, CPK13
Functional annotation CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5XP03
Pfam PF13499 PF07714
Panther DB PTHR24349 PTHR24349:SF145
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51850 : calcium-dependent protein kinase 13
RAP-DB (Rice) LOC_Os01g61590.1 : CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a043932 , Zm00025a014772 , Zm00025a032358 , Zm00025a039723 , Zm00025a013707 , Zm00025a037757 , Zm00025a024833 , Zm00025a025734 , Zm00025a033981 , Zm00025a014941 , Zm00025a012860 , Zm00025a047650 , Zm00025a033617 , Zm00025a014340 , Zm00025a032700 , Zm00025a048212 , Zm00025a056693 , Zm00025a008488 , Zm00025a054043 , Zm00025a056829 , Zm00025a017091 , Zm00025a010059 , Zm00025a048434 , Zm00025a008681
Brachypodium PNT69746 , KQK12547 , KQK10428 , KQK04719 , KQK08794 , KQK15660 , KQK05824 , PNT73937 , PNT68518 , KQJ91002 , KQJ84217 , PNT64929 , PNT64928 , KQK15659
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU1Hr1G092710.1 , HORVU1Hr1G092710.2 , HORVU6Hr1G094990.7 , HORVU6Hr1G094990.5 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.3 , HORVU1Hr1G071060.4 , HORVU1Hr1G071060.1 , HORVU1Hr1G071060.3 , HORVU7Hr1G056060.5 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.8 , HORVU1Hr1G071060.2 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU1Hr1G070840.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU1Hr1G070840.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU6Hr1G094990.1 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.7 , HORVU4Hr1G004540.20 , HORVU3Hr1G087600.6 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.4 , HORVU3Hr1G087600.5 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.1 , HORVU3Hr1G087600.8 , HORVU5Hr1G110900.5 , HORVU5Hr1G110900.1 , HORVU5Hr1G110900.2 , HORVU5Hr1G110900.3 , HORVU5Hr1G078430.3 , HORVU5Hr1G078430.2 , HORVU5Hr1G078430.5 , HORVU5Hr1G078430.4
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS1A02G424200 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS4D02G027600 , TraesCS7B02G165200 , TraesCS2B02G227000 , TraesCS1B02G301600 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS2D02G456400 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS4B02G030100 , TraesCS4B02G030100 , TraesCS1B02G456700 , TraesCS3D02G345500 , TraesCS5D02G122800 , TraesCS5B02G297700 , TraesCS7A02G267000 , TraesCS5B02G115400 , TraesCS5B02G115400 , TraesCS2D02G207400 , TraesCS5D02G122800 , TraesCS5A02G463100 , TraesCS2A02G456100 , TraesCS2B02G478100 , TraesCS6A02G421000 , TraesCS5B02G474500 , TraesCS1D02G433400 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS5D02G122800 , TraesCS3B02G383800 , TraesCS5D02G122800 , TraesCS2A02G199700 , TraesCS7D02G267700
Populus -


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cDNA sequences
Sobic.003G345000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G283600 HVA22, putative, expressed -
2 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
3 Sobic.001G540700 expressed protein -
4 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
5 Sobic.003G420300 zinc finger protein, putative, expressed -
6 Sobic.007G084200 expressed protein -
7 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
9 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
11 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
12 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
13 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
14 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
15 Sobic.002G253900 growth regulator related protein, putative, expressed -
16 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
17 Sobic.001G369800 monocopper oxidase, putative, expressed -
18 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
19 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
20 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3


Gene co-expression network
sample Sobic003G345000 Sobic003G345000 Sobic003G283600 Sobic003G283600 Sobic003G345000--Sobic003G283600 Sobic004G315700 Sobic004G315700 Sobic003G345000--Sobic004G315700 Sobic001G540700 Sobic001G540700 Sobic003G345000--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic003G345000--Sobic006G218900 Sobic003G420300 Sobic003G420300 Sobic003G345000--Sobic003G420300 Sobic007G084200 Sobic007G084200 Sobic003G345000--Sobic007G084200 Sobic009G225500 Sobic009G225500 Sobic003G345000--Sobic009G225500 Sobic009G212100 Sobic009G212100 Sobic003G345000--Sobic009G212100 Sobic003G292700 Sobic003G292700 Sobic003G345000--Sobic003G292700 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic001G369800 Sobic001G369800 Sobic003G283600--Sobic001G369800 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000 Sobic001G487200 Sobic001G487200 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic004G315700--Sobic003G420300 Sobic004G315700--Sobic006G218900 Sobic004G315700--Sobic003G345000 Sobic004G315700--Sobic001G540700 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic004G207000 Sobic004G207000 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic001G540700--Sobic004G315700 Sobic006G272800 Sobic006G272800 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic001G540700--Sobic003G345000 Sobic006G218900--Sobic004G315700 Sobic006G218900--Sobic001G369800 Sobic003G226700 Sobic003G226700 Sobic006G218900--Sobic003G226700 Sobic006G218900--Sobic001G540700 Sobic002G253900 Sobic002G253900 Sobic006G218900--Sobic002G253900 Sobic006G218900--Sobic003G345000 Sobic006G218900--Sobic001G487200 Sobic006G218900--Sobic002G284100 Sobic006G218900--Sobic007G084200 Sobic003G420300--Sobic003G292700 Sobic003G420300--Sobic003G226700 Sobic008G083500 Sobic008G083500 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic003G420300--Sobic007G084200 Sobic003G420300--Sobic009G052100 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic007G084200--Sobic003G345000 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic009G127800 Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic009G225500--Sobic010G086000 Sobic001G425700 Sobic001G425700 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic009G225500--Sobic006G272800 Sobic006G281900 Sobic006G281900 Sobic009G225500--Sobic006G281900 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic009G212100--Sobic006G084300 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic003G292700--Sobic003G420300 Sobic003G292700--Sobic003G226700 Sobic009G202801 Sobic009G202801 Sobic003G292700--Sobic009G202801 Sobic001G054700 Sobic001G054700 Sobic003G292700--Sobic001G054700 Sobic003G292700--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic003G292700--Sobic003G032200 Sobic001G377700 Sobic001G377700 Sobic003G292700--Sobic001G377700 Sobic002G021200 Sobic002G021200 Sobic003G292700--Sobic002G021200 Sobic003G292700--Sobic008G083500
Octagon: transcription factors


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