Gene annotation
Transcriptome id Sobic.003G212600.3,Sobic.003G212600.1
Synonym UBC37, Sb03g027230
Functional annotation ubiquitin-conjugating enzyme, putative, expressed
UniProt A0A1W0VYC9 , C5XQB3
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF59 PTHR24067:SF59 PTHR24067
NCBI CDD KOG0417; Ubiquitin-protein ligase
KEGG Orthology K13960; UBE2T, ubiquitin-conjugating enzyme E2 T
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24515 : ubiquitin-conjugating enzyme 37
RAP-DB (Rice) LOC_Os01g42040.1 : ubiquitin-conjugating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a028640
Brachypodium PNT75380 , KQK16882 , KQK16883 , PNT75378 , PNT75379
Barley HORVU1Hr1G013040.7 , HORVU1Hr1G013040.6 , HORVU1Hr1G013040.5 , HORVU1Hr1G013040.4 , HORVU1Hr1G013040.3 , HORVU1Hr1G013040.2 , HORVU1Hr1G013040.1
Wheat TraesCS1A02G063600 , TraesCS1A02G063600 , TraesCS1A02G063600 , TraesCS1B02G081500 , TraesCS1B02G081500 , TraesCS1B02G081500 , TraesCS1D02G064100
Populus -


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cDNA sequences
Sobic.003G212600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
2 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
3 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
4 Sobic.001G140700 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.009G087300 mitotic checkpoint family protein, putative, expressed -
6 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
7 Sobic.001G231200 expressed protein -
8 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
9 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
10 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
11 Sobic.001G210000 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
12 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
13 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
14 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.007G209600 ENT domain containing protein, expressed -
16 Sobic.002G303800 expressed protein -
17 Sobic.001G212600 a_IG002N01.7, putative, expressed -
18 Sobic.003G393100 chromosome segregation protein, putative, expressed K06674: structural maintenance of chromosome 2
19 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G212600 Sobic003G212600 Sobic001G054700 Sobic001G054700 Sobic003G212600--Sobic001G054700 Sobic007G076200 Sobic007G076200 Sobic003G212600--Sobic007G076200 Sobic002G204400 Sobic002G204400 Sobic003G212600--Sobic002G204400 Sobic001G140700 Sobic001G140700 Sobic003G212600--Sobic001G140700 Sobic009G087300 Sobic009G087300 Sobic003G212600--Sobic009G087300 Sobic010G105400 Sobic010G105400 Sobic003G212600--Sobic010G105400 Sobic001G231200 Sobic001G231200 Sobic003G212600--Sobic001G231200 Sobic002G021200 Sobic002G021200 Sobic003G212600--Sobic002G021200 Sobic001G296800 Sobic001G296800 Sobic003G212600--Sobic001G296800 Sobic006G221300 Sobic006G221300 Sobic001G054700--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic001G054700--Sobic009G077300 Sobic004G108400 Sobic004G108400 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic009G127800 Sobic009G127800 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic010G024000 Sobic010G024000 Sobic007G076200--Sobic010G024000 Sobic006G193100 Sobic006G193100 Sobic007G076200--Sobic006G193100 Sobic009G202801 Sobic009G202801 Sobic007G076200--Sobic009G202801 Sobic010G222800 Sobic010G222800 Sobic007G076200--Sobic010G222800 Sobic007G087800 Sobic007G087800 Sobic007G076200--Sobic007G087800 Sobic008G070700 Sobic008G070700 Sobic007G076200--Sobic008G070700 Sobic002G074000 Sobic002G074000 Sobic007G076200--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G076200--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic007G076200--Sobic001G008300 Sobic009G184200 Sobic009G184200 Sobic002G204400--Sobic009G184200 Sobic008G148000 Sobic008G148000 Sobic002G204400--Sobic008G148000 Sobic003G393100 Sobic003G393100 Sobic002G204400--Sobic003G393100 Sobic002G204400--Sobic010G105400 Sobic006G281400 Sobic006G281400 Sobic002G204400--Sobic006G281400 Sobic005G000500 Sobic005G000500 Sobic002G204400--Sobic005G000500 Sobic007G027900 Sobic007G027900 Sobic002G204400--Sobic007G027900 Sobic001G398400 Sobic001G398400 Sobic002G204400--Sobic001G398400 Sobic004G271300 Sobic004G271300 Sobic002G204400--Sobic004G271300 Sobic007G125300 Sobic007G125300 Sobic001G140700--Sobic007G125300 Sobic004G069400 Sobic004G069400 Sobic001G140700--Sobic004G069400 Sobic006G094100 Sobic006G094100 Sobic001G140700--Sobic006G094100 Sobic002G236700 Sobic002G236700 Sobic001G140700--Sobic002G236700 Sobic001G140700--Sobic003G212600 Sobic001G268300 Sobic001G268300 Sobic001G140700--Sobic001G268300 Sobic006G120600 Sobic006G120600 Sobic001G140700--Sobic006G120600 Sobic001G140700--Sobic009G087300 Sobic010G250400 Sobic010G250400 Sobic001G140700--Sobic010G250400 Sobic009G087300--Sobic002G204400 Sobic009G087300--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic009G087300--Sobic005G144600 Sobic002G303800 Sobic002G303800 Sobic009G087300--Sobic002G303800 Sobic003G201000 Sobic003G201000 Sobic009G087300--Sobic003G201000 Sobic001G122100 Sobic001G122100 Sobic009G087300--Sobic001G122100 Sobic003G444300 Sobic003G444300 Sobic009G087300--Sobic003G444300 Sobic009G087300--Sobic006G281400 Sobic009G087300--Sobic005G000500 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic010G105400--Sobic002G204400 Sobic008G096200 Sobic008G096200 Sobic001G231200--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic001G231200--Sobic001G487200 Sobic002G370400 Sobic002G370400 Sobic001G231200--Sobic002G370400 Sobic010G211800 Sobic010G211800 Sobic001G231200--Sobic010G211800 Sobic001G231200--Sobic010G105400 Sobic010G129700 Sobic010G129700 Sobic001G231200--Sobic010G129700 Sobic003G013000 Sobic003G013000 Sobic001G231200--Sobic003G013000 Sobic003G444100 Sobic003G444100 Sobic001G231200--Sobic003G444100 Sobic002G394500 Sobic002G394500 Sobic001G231200--Sobic002G394500 Sobic007G187700 Sobic007G187700 Sobic002G021200--Sobic007G187700 Sobic001G377700 Sobic001G377700 Sobic002G021200--Sobic001G377700 Sobic002G168000 Sobic002G168000 Sobic002G021200--Sobic002G168000 Sobic006G281900 Sobic006G281900 Sobic002G021200--Sobic006G281900 Sobic002G021200--Sobic001G054700 Sobic003G292700 Sobic003G292700 Sobic002G021200--Sobic003G292700 Sobic003G055600 Sobic003G055600 Sobic002G021200--Sobic003G055600 Sobic005G157300 Sobic005G157300 Sobic002G021200--Sobic005G157300 Sobic002G021200--Sobic009G077300 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100
Octagon: transcription factors


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