Gene annotation
Transcriptome id Sobic.002G303800.1
Synonym Sb02g033410
Functional annotation expressed protein
UniProt C5X8L2
Pfam PF07160
Panther DB PTHR28573 PTHR28573:SF1
NCBI CDD KOG4832; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60660 : -
RAP-DB (Rice) LOC_Os07g30110.1 : expressed protein
MaizeGDB (Corn) Zm00025a048068
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
2 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
3 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
4 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
5 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
6 Sobic.001G146900 expressed protein -
7 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
8 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
9 Sobic.001G083300 transducin family protein, putative, expressed K02180: cell cycle arrest protein BUB3
10 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
12 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
13 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
14 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
15 Sobic.009G087300 mitotic checkpoint family protein, putative, expressed -
16 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
18 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
19 Sobic.004G208100 expressed protein -
20 Sobic.010G191000 expressed protein -


Gene co-expression network
sample Sobic002G303800 Sobic002G303800 Sobic003G444300 Sobic003G444300 Sobic002G303800--Sobic003G444300 Sobic006G120600 Sobic006G120600 Sobic002G303800--Sobic006G120600 Sobic001G169800 Sobic001G169800 Sobic002G303800--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic002G303800--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic002G303800--Sobic010G103700 Sobic001G146900 Sobic001G146900 Sobic002G303800--Sobic001G146900 Sobic003G179500 Sobic003G179500 Sobic002G303800--Sobic003G179500 Sobic006G051000 Sobic006G051000 Sobic002G303800--Sobic006G051000 Sobic001G083300 Sobic001G083300 Sobic002G303800--Sobic001G083300 Sobic001G456500 Sobic001G456500 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic001G105800 Sobic001G105800 Sobic003G444300--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic003G444300--Sobic001G142000 Sobic004G331600 Sobic004G331600 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic003G444300--Sobic002G303800 Sobic010G105400 Sobic010G105400 Sobic003G444300--Sobic010G105400 Sobic006G120600--Sobic010G103700 Sobic006G120600--Sobic003G183700 Sobic006G195500 Sobic006G195500 Sobic006G120600--Sobic006G195500 Sobic002G290000 Sobic002G290000 Sobic006G120600--Sobic002G290000 Sobic006G120600--Sobic002G303800 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic009G087000 Sobic009G087000 Sobic006G120600--Sobic009G087000 Sobic006G120600--Sobic006G051000 Sobic001G169800--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic001G169800--Sobic006G116500 Sobic001G169800--Sobic003G444300 Sobic001G169800--Sobic001G083300 Sobic002G223900 Sobic002G223900 Sobic001G169800--Sobic002G223900 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic001G169800--Sobic003G179500 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic003G183700--Sobic010G103700 Sobic003G183700--Sobic003G179500 Sobic005G110535 Sobic005G110535 Sobic003G183700--Sobic005G110535 Sobic008G129200 Sobic008G129200 Sobic003G183700--Sobic008G129200 Sobic004G321400 Sobic004G321400 Sobic003G183700--Sobic004G321400 Sobic010G147700 Sobic010G147700 Sobic003G183700--Sobic010G147700 Sobic010G103700--Sobic003G183700 Sobic010G103700--Sobic003G179500 Sobic010G103700--Sobic006G120600 Sobic010G103700--Sobic006G195500 Sobic010G103700--Sobic006G051000 Sobic010G103700--Sobic009G087000 Sobic010G103700--Sobic010G147700 Sobic010G103700--Sobic006G116500 Sobic010G103700--Sobic004G355500 Sobic009G172950 Sobic009G172950 Sobic001G146900--Sobic009G172950 Sobic001G146900--Sobic009G087000 Sobic001G146900--Sobic003G183700 Sobic001G146900--Sobic001G456500 Sobic001G146900--Sobic001G083300 Sobic001G146900--Sobic002G303800 Sobic001G146900--Sobic003G444300 Sobic001G146900--Sobic004G321400 Sobic001G146900--Sobic001G169800 Sobic003G179500--Sobic003G183700 Sobic003G179500--Sobic010G103700 Sobic003G179500--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic003G179500--Sobic005G144600 Sobic003G179500--Sobic010G147700 Sobic003G179500--Sobic009G087000 Sobic003G179500--Sobic005G110535 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic006G051000--Sobic003G183700 Sobic006G051000--Sobic006G195500 Sobic006G051000--Sobic010G103700 Sobic006G196600 Sobic006G196600 Sobic006G051000--Sobic006G196600 Sobic006G051000--Sobic003G179500 Sobic006G051000--Sobic009G087000 Sobic009G109300 Sobic009G109300 Sobic006G051000--Sobic009G109300 Sobic006G051000--Sobic008G129200 Sobic006G051000--Sobic005G110535 Sobic001G083300--Sobic001G456500 Sobic001G083300--Sobic002G223900 Sobic001G083300--Sobic003G444300 Sobic001G083300--Sobic010G147700 Sobic001G083300--Sobic009G087000 Sobic001G083300--Sobic003G183700 Sobic001G083300--Sobic008G129200 Sobic001G083300--Sobic001G105800 Sobic001G083300--Sobic004G331600
Octagon: transcription factors


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