Gene annotation
Transcriptome id Sobic.001G122100.5,Sobic.001G122100.3,Sobic.001G122100.2,Sobic.001G122100.1,Sobic.001G122100.4
Synonym Sb01g010730, PPK1
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5S5E3 , A0A1Z5S5B6 , C5WNS0 , A0A1Z5S5P1 , A0A1B6QIK9
Pfam PF07714
Panther DB PTHR22974 PTHR22974:SF21
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases KOG0581Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology K08866; TTK, serine/threonine-protein kinase TTK/MPS1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0007093mitotic cell cycle checkpoint GO:0004712protein serine/threonine/tyrosine kinase activity


Orthologs (automatic annotation)
TAIR AT1G77720 : putative protein kinase 1
RAP-DB (Rice) LOC_Os03g49750.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007771
Brachypodium KQK13568 , KQK13566 , KQK13567 , KQK13565
Barley HORVU4Hr1G006710.27 , HORVU4Hr1G006710.26 , HORVU4Hr1G006710.25 , HORVU4Hr1G006710.24 , HORVU4Hr1G006710.23 , HORVU4Hr1G006710.22 , HORVU4Hr1G006710.21 , HORVU4Hr1G006710.20 , HORVU4Hr1G006710.16 , HORVU4Hr1G006710.17 , HORVU4Hr1G006710.14 , HORVU4Hr1G006710.15 , HORVU4Hr1G006710.12 , HORVU4Hr1G006710.13 , HORVU4Hr1G006710.10 , HORVU4Hr1G006710.11 , HORVU4Hr1G006710.18 , HORVU4Hr1G006710.19 , HORVU4Hr1G006710.4 , HORVU4Hr1G006710.5 , HORVU4Hr1G006710.6 , HORVU4Hr1G006710.7 , HORVU4Hr1G006710.1 , HORVU4Hr1G006710.2 , HORVU4Hr1G006710.3 , HORVU4Hr1G006710.8 , HORVU4Hr1G006710.9
Wheat TraesCS4A02G271800 , TraesCS4A02G271800 , TraesCS4B02G042200 , TraesCS4B02G042200 , TraesCS4B02G042200 , TraesCS4D02G039400 , TraesCS4D02G039400 , TraesCS4D02G039400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G303800 expressed protein -
2 Sobic.009G087300 mitotic checkpoint family protein, putative, expressed -
3 Sobic.006G281400 expressed protein -
4 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
5 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
6 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
7 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
8 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
9 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
10 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
11 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
12 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
13 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
14 Sobic.003G423600 expressed protein K06228: fused
15 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
16 Sobic.004G208100 expressed protein -
17 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
18 Sobic.001G051300 BEE 1, putative, expressed -
19 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
20 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1


Gene co-expression network
sample Sobic001G122100 Sobic001G122100 Sobic002G303800 Sobic002G303800 Sobic001G122100--Sobic002G303800 Sobic009G087300 Sobic009G087300 Sobic001G122100--Sobic009G087300 Sobic006G281400 Sobic006G281400 Sobic001G122100--Sobic006G281400 Sobic003G369200 Sobic003G369200 Sobic001G122100--Sobic003G369200 Sobic002G021200 Sobic002G021200 Sobic001G122100--Sobic002G021200 Sobic003G444300 Sobic003G444300 Sobic001G122100--Sobic003G444300 Sobic009G052100 Sobic009G052100 Sobic001G122100--Sobic009G052100 Sobic010G105400 Sobic010G105400 Sobic001G122100--Sobic010G105400 Sobic010G252700 Sobic010G252700 Sobic001G122100--Sobic010G252700 Sobic002G303800--Sobic003G444300 Sobic006G120600 Sobic006G120600 Sobic002G303800--Sobic006G120600 Sobic001G169800 Sobic001G169800 Sobic002G303800--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic002G303800--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic002G303800--Sobic010G103700 Sobic001G146900 Sobic001G146900 Sobic002G303800--Sobic001G146900 Sobic003G179500 Sobic003G179500 Sobic002G303800--Sobic003G179500 Sobic006G051000 Sobic006G051000 Sobic002G303800--Sobic006G051000 Sobic001G083300 Sobic001G083300 Sobic002G303800--Sobic001G083300 Sobic002G204400 Sobic002G204400 Sobic009G087300--Sobic002G204400 Sobic009G087300--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic009G087300--Sobic005G144600 Sobic009G087300--Sobic002G303800 Sobic003G201000 Sobic003G201000 Sobic009G087300--Sobic003G201000 Sobic009G087300--Sobic001G122100 Sobic009G087300--Sobic003G444300 Sobic009G087300--Sobic006G281400 Sobic005G000500 Sobic005G000500 Sobic009G087300--Sobic005G000500 Sobic006G281400--Sobic002G204400 Sobic003G423600 Sobic003G423600 Sobic006G281400--Sobic003G423600 Sobic008G148000 Sobic008G148000 Sobic006G281400--Sobic008G148000 Sobic006G281400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic006G281400--Sobic001G398400 Sobic006G281400--Sobic010G105400 Sobic006G281400--Sobic003G369200 Sobic005G110535 Sobic005G110535 Sobic006G281400--Sobic005G110535 Sobic004G156200 Sobic004G156200 Sobic006G281400--Sobic004G156200 Sobic010G147700 Sobic010G147700 Sobic003G369200--Sobic010G147700 Sobic003G369200--Sobic005G110535 Sobic009G087000 Sobic009G087000 Sobic003G369200--Sobic009G087000 Sobic003G369200--Sobic003G201000 Sobic003G393100 Sobic003G393100 Sobic003G369200--Sobic003G393100 Sobic009G184200 Sobic009G184200 Sobic003G369200--Sobic009G184200 Sobic003G369200--Sobic003G183700 Sobic006G029300 Sobic006G029300 Sobic003G369200--Sobic006G029300 Sobic007G168900 Sobic007G168900 Sobic003G369200--Sobic007G168900 Sobic007G187700 Sobic007G187700 Sobic002G021200--Sobic007G187700 Sobic001G377700 Sobic001G377700 Sobic002G021200--Sobic001G377700 Sobic002G168000 Sobic002G168000 Sobic002G021200--Sobic002G168000 Sobic006G281900 Sobic006G281900 Sobic002G021200--Sobic006G281900 Sobic001G054700 Sobic001G054700 Sobic002G021200--Sobic001G054700 Sobic003G292700 Sobic003G292700 Sobic002G021200--Sobic003G292700 Sobic003G055600 Sobic003G055600 Sobic002G021200--Sobic003G055600 Sobic005G157300 Sobic005G157300 Sobic002G021200--Sobic005G157300 Sobic009G077300 Sobic009G077300 Sobic002G021200--Sobic009G077300 Sobic001G456500 Sobic001G456500 Sobic003G444300--Sobic001G456500 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic001G105800 Sobic001G105800 Sobic003G444300--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic003G444300--Sobic001G142000 Sobic004G331600 Sobic004G331600 Sobic003G444300--Sobic004G331600 Sobic003G444300--Sobic003G201000 Sobic003G444300--Sobic002G303800 Sobic003G444300--Sobic010G105400 Sobic004G315700 Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic010G105400--Sobic009G184200 Sobic010G105400--Sobic005G000500 Sobic010G105400--Sobic001G398400 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic010G105400--Sobic007G168900 Sobic010G105400--Sobic002G204400 Sobic008G179000 Sobic008G179000 Sobic010G252700--Sobic008G179000 Sobic007G123100 Sobic007G123100 Sobic010G252700--Sobic007G123100 Sobic010G252700--Sobic009G052100 Sobic002G362200 Sobic002G362200 Sobic010G252700--Sobic002G362200 Sobic001G149100 Sobic001G149100 Sobic010G252700--Sobic001G149100 Sobic008G031200 Sobic008G031200 Sobic010G252700--Sobic008G031200 Sobic008G090000 Sobic008G090000 Sobic010G252700--Sobic008G090000 Sobic010G252700--Sobic006G071628 Sobic010G252700--Sobic010G250800
Octagon: transcription factors


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