Gene annotation
Transcriptome id Sobic.009G052100.1
Synonym GCP2, TUBG2, Sb09g004420, ATGCP2
Functional annotation tubulin/FtsZ domain containing protein, putative, expressed
UniProt C5Z0K9
Pfam PF03953 PF00091
Panther DB PTHR11588 PTHR11588:SF7
NCBI CDD -
KEGG Orthology K10389; tubulin gamma
Gene Ontology GO:0003924; GTPase activity GO:0007017microtubule-based process GO:0005874microtubule GO:0007020microtubule nucleation GO:0000930gamma-tubulin complex


Orthologs (automatic annotation)
TAIR AT5G05620 : gamma-tubulin complex protein 2
RAP-DB (Rice) LOC_Os05g06450.2 : tubulin/FtsZ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a036830 , Zm00025a042973
Brachypodium KQK07382
Barley HORVU1Hr1G023030.6 , HORVU1Hr1G023030.2 , HORVU1Hr1G023030.9 , HORVU1Hr1G023030.5 , HORVU1Hr1G023030.4 , HORVU1Hr1G023030.7 , HORVU1Hr1G023030.1 , HORVU1Hr1G023030.3 , HORVU1Hr1G023030.8
Wheat TraesCS1A02G099400 , TraesCS1A02G099400 , TraesCS1D02G107300 , TraesCS1B02G124800
Populus PNT03895 , PNT03896 , PNT03897 , PNT03898


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cDNA sequences
Sobic.009G052100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
2 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
3 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
4 Sobic.009G049200 Spc97 / Spc98 family protein, putative, expressed K16571: TUBGCP4, gamma-tubulin complex component 4
5 Sobic.006G071628 - -
6 Sobic.010G250800 DNA binding protein, putative, expressed -
7 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
8 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
9 Sobic.003G420300 zinc finger protein, putative, expressed -
10 Sobic.010G103500 ATMAP70 protein, putative, expressed -
11 Sobic.006G281400 expressed protein -
12 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
13 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
14 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
15 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
16 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
17 Sobic.009G202801 - K10406: kinesin family member C2/C3
18 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
19 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
20 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase


Gene co-expression network
sample Sobic009G052100 Sobic009G052100 Sobic004G315700 Sobic004G315700 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic009G052100--Sobic001G507200 Sobic009G049200 Sobic009G049200 Sobic009G052100--Sobic009G049200 Sobic006G071628 Sobic006G071628 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic001G487200 Sobic001G487200 Sobic004G315700--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic005G110535 Sobic005G110535 Sobic004G156200--Sobic005G110535 Sobic005G068800 Sobic005G068800 Sobic004G156200--Sobic005G068800 Sobic003G423600 Sobic003G423600 Sobic004G156200--Sobic003G423600 Sobic002G290000 Sobic002G290000 Sobic004G156200--Sobic002G290000 Sobic009G087000 Sobic009G087000 Sobic004G156200--Sobic009G087000 Sobic006G281400 Sobic006G281400 Sobic004G156200--Sobic006G281400 Sobic003G369200 Sobic003G369200 Sobic004G156200--Sobic003G369200 Sobic009G146250 Sobic009G146250 Sobic004G156200--Sobic009G146250 Sobic004G156200--Sobic009G052100 Sobic001G507200--Sobic009G052100 Sobic001G507200--Sobic009G049200 Sobic006G173200 Sobic006G173200 Sobic001G507200--Sobic006G173200 Sobic001G507200--Sobic004G315700 Sobic001G507200--Sobic006G071628 Sobic001G507200--Sobic001G296800 Sobic001G385400 Sobic001G385400 Sobic001G507200--Sobic001G385400 Sobic008G192700 Sobic008G192700 Sobic001G507200--Sobic008G192700 Sobic002G399900 Sobic002G399900 Sobic001G507200--Sobic002G399900 Sobic009G049200--Sobic009G052100 Sobic009G049200--Sobic001G507200 Sobic001G143600 Sobic001G143600 Sobic009G049200--Sobic001G143600 Sobic003G250900 Sobic003G250900 Sobic009G049200--Sobic003G250900 Sobic009G049200--Sobic010G250800 Sobic004G231200 Sobic004G231200 Sobic009G049200--Sobic004G231200 Sobic004G307900 Sobic004G307900 Sobic009G049200--Sobic004G307900 Sobic009G049200--Sobic003G423600 Sobic008G015200 Sobic008G015200 Sobic009G049200--Sobic008G015200 Sobic006G071628--Sobic009G052100 Sobic001G051300 Sobic001G051300 Sobic006G071628--Sobic001G051300 Sobic006G071628--Sobic006G084300 Sobic007G173000 Sobic007G173000 Sobic006G071628--Sobic007G173000 Sobic006G071628--Sobic010G250800 Sobic001G199500 Sobic001G199500 Sobic006G071628--Sobic001G199500 Sobic006G071628--Sobic004G156200 Sobic006G071628--Sobic001G507200 Sobic006G071628--Sobic001G296800 Sobic010G250800--Sobic009G052100 Sobic007G006800 Sobic007G006800 Sobic010G250800--Sobic007G006800 Sobic010G250800--Sobic006G071628 Sobic001G408300 Sobic001G408300 Sobic010G250800--Sobic001G408300 Sobic010G250800--Sobic001G385400 Sobic009G167100 Sobic009G167100 Sobic010G250800--Sobic009G167100 Sobic005G088900 Sobic005G088900 Sobic010G250800--Sobic005G088900 Sobic010G250800--Sobic009G049200 Sobic004G038100 Sobic004G038100 Sobic010G250800--Sobic004G038100 Sobic008G148000 Sobic008G148000 Sobic003G315700--Sobic008G148000 Sobic006G193100 Sobic006G193100 Sobic003G315700--Sobic006G193100 Sobic004G306100 Sobic004G306100 Sobic003G315700--Sobic004G306100 Sobic003G315700--Sobic002G290000 Sobic009G202801 Sobic009G202801 Sobic003G315700--Sobic009G202801 Sobic004G328300 Sobic004G328300 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic002G113400 Sobic002G113400 Sobic003G315700--Sobic002G113400 Sobic003G315700--Sobic009G052100 Sobic008G179000 Sobic008G179000 Sobic010G252700--Sobic008G179000 Sobic007G123100 Sobic007G123100 Sobic010G252700--Sobic007G123100 Sobic010G252700--Sobic009G052100 Sobic002G362200 Sobic002G362200 Sobic010G252700--Sobic002G362200 Sobic001G149100 Sobic001G149100 Sobic010G252700--Sobic001G149100 Sobic008G031200 Sobic008G031200 Sobic010G252700--Sobic008G031200 Sobic008G090000 Sobic008G090000 Sobic010G252700--Sobic008G090000 Sobic010G252700--Sobic006G071628 Sobic010G252700--Sobic010G250800 Sobic003G292700 Sobic003G292700 Sobic003G420300--Sobic003G292700 Sobic003G226700 Sobic003G226700 Sobic003G420300--Sobic003G226700 Sobic008G083500 Sobic008G083500 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic003G420300--Sobic007G084200 Sobic003G420300--Sobic009G052100
Octagon: transcription factors


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