Gene annotation
Transcriptome id Sobic.001G507200.2,Sobic.001G507200.1
Synonym PIR, ATSRA1, PIRP, KLK, Sb01g047340, SRA1, PIR121
Functional annotation PIR, putative, expressed
UniProt A0A1Z5SBE9 , A0A1Z5SBL9
Pfam PF07159 PF05994
Panther DB PTHR12195
NCBI CDD KOG3534; p53 inducible protein PIR121
KEGG Orthology K05749; cytoplasmic FMR1 interacting protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18410 : transcription activators
RAP-DB (Rice) LOC_Os03g05020.1 : PIR, putative, expressed
MaizeGDB (Corn) Zm00025a000582
Brachypodium KQK23697 , KQK23696 , PNT78224
Barley HORVU4Hr1G078840.11 , HORVU4Hr1G078840.10 , HORVU4Hr1G078840.13 , HORVU4Hr1G078840.12 , HORVU4Hr1G078840.5 , HORVU4Hr1G078840.4 , HORVU4Hr1G078840.7 , HORVU4Hr1G078840.6 , HORVU4Hr1G078840.1 , HORVU4Hr1G078840.3 , HORVU4Hr1G078840.2 , HORVU4Hr1G078840.9 , HORVU4Hr1G078840.8
Wheat TraesCS4B02G308000 , TraesCS4B02G308000 , TraesCS4B02G308000 , TraesCS4D02G306200 , TraesCS4D02G306200 , TraesCS4D02G306200 , TraesCS4D02G306200 , TraesCS4D02G306200 , TraesCS4B02G308000 , TraesCS4A02G408900 , TraesCS4B02G308000 , TraesCS4A02G408900 , TraesCS4A02G408900 , TraesCS4A02G408900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
2 Sobic.009G049200 Spc97 / Spc98 family protein, putative, expressed K16571: TUBGCP4, gamma-tubulin complex component 4
3 Sobic.006G173200 beige/BEACH domain containing protein, expressed -
4 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
5 Sobic.006G071628 - -
6 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
7 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
8 Sobic.008G192700 ATMAP70 protein, putative, expressed -
9 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
10 Sobic.001G143600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
11 Sobic.005G064100 expressed protein -
12 Sobic.010G103500 ATMAP70 protein, putative, expressed -
13 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
14 Sobic.001G159800 KIP1, putative, expressed -
15 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
16 Sobic.003G009200 expressed protein -
17 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
19 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
20 Sobic.007G051400 transmembrane 9 superfamily member, putative, expressed -


Gene co-expression network
sample Sobic001G507200 Sobic001G507200 Sobic009G052100 Sobic009G052100 Sobic001G507200--Sobic009G052100 Sobic009G049200 Sobic009G049200 Sobic001G507200--Sobic009G049200 Sobic006G173200 Sobic006G173200 Sobic001G507200--Sobic006G173200 Sobic004G315700 Sobic004G315700 Sobic001G507200--Sobic004G315700 Sobic006G071628 Sobic006G071628 Sobic001G507200--Sobic006G071628 Sobic001G296800 Sobic001G296800 Sobic001G507200--Sobic001G296800 Sobic001G385400 Sobic001G385400 Sobic001G507200--Sobic001G385400 Sobic008G192700 Sobic008G192700 Sobic001G507200--Sobic008G192700 Sobic002G399900 Sobic002G399900 Sobic001G507200--Sobic002G399900 Sobic009G052100--Sobic004G315700 Sobic004G156200 Sobic004G156200 Sobic009G052100--Sobic004G156200 Sobic009G052100--Sobic001G507200 Sobic009G052100--Sobic009G049200 Sobic009G052100--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic009G052100--Sobic010G250800 Sobic003G315700 Sobic003G315700 Sobic009G052100--Sobic003G315700 Sobic010G252700 Sobic010G252700 Sobic009G052100--Sobic010G252700 Sobic003G420300 Sobic003G420300 Sobic009G052100--Sobic003G420300 Sobic009G049200--Sobic009G052100 Sobic009G049200--Sobic001G507200 Sobic001G143600 Sobic001G143600 Sobic009G049200--Sobic001G143600 Sobic003G250900 Sobic003G250900 Sobic009G049200--Sobic003G250900 Sobic009G049200--Sobic010G250800 Sobic004G231200 Sobic004G231200 Sobic009G049200--Sobic004G231200 Sobic004G307900 Sobic004G307900 Sobic009G049200--Sobic004G307900 Sobic003G423600 Sobic003G423600 Sobic009G049200--Sobic003G423600 Sobic008G015200 Sobic008G015200 Sobic009G049200--Sobic008G015200 Sobic006G173200--Sobic001G507200 Sobic009G073400 Sobic009G073400 Sobic006G173200--Sobic009G073400 Sobic003G435500 Sobic003G435500 Sobic006G173200--Sobic003G435500 Sobic001G159800 Sobic001G159800 Sobic006G173200--Sobic001G159800 Sobic010G090500 Sobic010G090500 Sobic006G173200--Sobic010G090500 Sobic009G105900 Sobic009G105900 Sobic006G173200--Sobic009G105900 Sobic006G173200--Sobic001G385400 Sobic006G173200--Sobic010G250800 Sobic006G173200--Sobic009G052100 Sobic001G487200 Sobic001G487200 Sobic004G315700--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic006G071628--Sobic009G052100 Sobic001G051300 Sobic001G051300 Sobic006G071628--Sobic001G051300 Sobic006G071628--Sobic006G084300 Sobic007G173000 Sobic007G173000 Sobic006G071628--Sobic007G173000 Sobic006G071628--Sobic010G250800 Sobic001G199500 Sobic001G199500 Sobic006G071628--Sobic001G199500 Sobic006G071628--Sobic004G156200 Sobic006G071628--Sobic001G507200 Sobic006G071628--Sobic001G296800 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic001G296800--Sobic009G052100 Sobic001G385400--Sobic001G143600 Sobic002G143200 Sobic002G143200 Sobic001G385400--Sobic002G143200 Sobic001G385400--Sobic003G435500 Sobic001G385400--Sobic008G015200 Sobic001G385400--Sobic010G250800 Sobic001G385400--Sobic001G507200 Sobic002G002100 Sobic002G002100 Sobic001G385400--Sobic002G002100 Sobic009G167100 Sobic009G167100 Sobic001G385400--Sobic009G167100 Sobic006G140600 Sobic006G140600 Sobic001G385400--Sobic006G140600 Sobic001G285200 Sobic001G285200 Sobic008G192700--Sobic001G285200 Sobic008G192700--Sobic008G015200 Sobic010G049300 Sobic010G049300 Sobic008G192700--Sobic010G049300 Sobic002G074000 Sobic002G074000 Sobic008G192700--Sobic002G074000 Sobic008G148500 Sobic008G148500 Sobic008G192700--Sobic008G148500 Sobic006G272500 Sobic006G272500 Sobic008G192700--Sobic006G272500 Sobic002G419200 Sobic002G419200 Sobic008G192700--Sobic002G419200 Sobic008G192700--Sobic001G507200 Sobic001G026800 Sobic001G026800 Sobic008G192700--Sobic001G026800 Sobic006G265600 Sobic006G265600 Sobic002G399900--Sobic006G265600 Sobic010G172400 Sobic010G172400 Sobic002G399900--Sobic010G172400 Sobic002G182000 Sobic002G182000 Sobic002G399900--Sobic002G182000 Sobic002G142700 Sobic002G142700 Sobic002G399900--Sobic002G142700 Sobic003G222700 Sobic003G222700 Sobic002G399900--Sobic003G222700 Sobic001G115500 Sobic001G115500 Sobic002G399900--Sobic001G115500 Sobic001G474400 Sobic001G474400 Sobic002G399900--Sobic001G474400 Sobic001G123600 Sobic001G123600 Sobic002G399900--Sobic001G123600 Sobic002G399900--Sobic001G507200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.