Gene annotation
Transcriptome id Sobic.007G051400.1
Synonym Sb07g004170
Functional annotation transmembrane 9 superfamily member, putative, expressed
UniProt A0A1B6PFP3
Pfam PF02990
Panther DB PTHR10766 PTHR10766:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G01970 : Endomembrane protein 70 protein family
RAP-DB (Rice) LOC_Os03g13380.1 : transmembrane 9 superfamily member, putative, expressed
MaizeGDB (Corn) Zm00025a055103
Brachypodium KQJ95285
Barley HORVU4Hr1G064710.4 , HORVU4Hr1G064710.5 , HORVU4Hr1G064710.1 , HORVU4Hr1G064710.2 , HORVU4Hr1G064710.3
Wheat TraesCS7B02G189400 , TraesCS7B02G189400 , TraesCS7D02G293600 , TraesCS4D02G232300 , TraesCS7A02G296000 , TraesCS7A02G296000
Populus -


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cDNA sequences
Sobic.007G051400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
2 Sobic.004G277400 glucosyltransferase, putative, expressed K03849: alpha-1,3-glucosyltransferase
3 Sobic.004G343200 dehydrogenase, putative, expressed K00121: frmA, ADH5, S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
4 Sobic.004G129500 expressed protein -
5 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
6 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
7 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
8 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
9 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
10 Sobic.002G043000 HEN1, putative, expressed -
11 Sobic.002G208400 regulator protein, putative, expressed -
12 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
13 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
14 Sobic.009G049200 Spc97 / Spc98 family protein, putative, expressed K16571: TUBGCP4, gamma-tubulin complex component 4
15 Sobic.001G229300 expressed protein -
16 Sobic.004G247100 peptidase, putative, expressed -
17 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
18 Sobic.003G360300 exostosin family domain containing protein, expressed -
19 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
20 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)


Gene co-expression network
sample Sobic007G051400 Sobic007G051400 Sobic002G142700 Sobic002G142700 Sobic007G051400--Sobic002G142700 Sobic004G277400 Sobic004G277400 Sobic007G051400--Sobic004G277400 Sobic004G343200 Sobic004G343200 Sobic007G051400--Sobic004G343200 Sobic004G129500 Sobic004G129500 Sobic007G051400--Sobic004G129500 Sobic001G191900 Sobic001G191900 Sobic007G051400--Sobic001G191900 Sobic002G426100 Sobic002G426100 Sobic007G051400--Sobic002G426100 Sobic010G172400 Sobic010G172400 Sobic007G051400--Sobic010G172400 Sobic004G256300 Sobic004G256300 Sobic007G051400--Sobic004G256300 Sobic001G507200 Sobic001G507200 Sobic007G051400--Sobic001G507200 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic002G142700--Sobic007G051400 Sobic002G208400 Sobic002G208400 Sobic002G142700--Sobic002G208400 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic003G222700 Sobic003G222700 Sobic002G142700--Sobic003G222700 Sobic001G229300 Sobic001G229300 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic003G360300 Sobic003G360300 Sobic002G142700--Sobic003G360300 Sobic004G151200 Sobic004G151200 Sobic004G277400--Sobic004G151200 Sobic006G265600 Sobic006G265600 Sobic004G277400--Sobic006G265600 Sobic005G114500 Sobic005G114500 Sobic004G277400--Sobic005G114500 Sobic004G277400--Sobic001G191900 Sobic004G277400--Sobic003G360300 Sobic004G277400--Sobic007G051400 Sobic004G277400--Sobic003G222700 Sobic003G005900 Sobic003G005900 Sobic004G277400--Sobic003G005900 Sobic001G151600 Sobic001G151600 Sobic004G277400--Sobic001G151600 Sobic004G343200--Sobic007G051400 Sobic003G311500 Sobic003G311500 Sobic004G343200--Sobic003G311500 Sobic004G343200--Sobic003G360300 Sobic007G209600 Sobic007G209600 Sobic004G343200--Sobic007G209600 Sobic001G488100 Sobic001G488100 Sobic004G343200--Sobic001G488100 Sobic006G255900 Sobic006G255900 Sobic004G343200--Sobic006G255900 Sobic004G343200--Sobic001G229300 Sobic004G342300 Sobic004G342300 Sobic004G343200--Sobic004G342300 Sobic009G176700 Sobic009G176700 Sobic004G343200--Sobic009G176700 Sobic007G036800 Sobic007G036800 Sobic004G129500--Sobic007G036800 Sobic010G103500 Sobic010G103500 Sobic004G129500--Sobic010G103500 Sobic001G296800 Sobic001G296800 Sobic004G129500--Sobic001G296800 Sobic003G028400 Sobic003G028400 Sobic004G129500--Sobic003G028400 Sobic003G411700 Sobic003G411700 Sobic004G129500--Sobic003G411700 Sobic004G129500--Sobic002G426100 Sobic002G123600 Sobic002G123600 Sobic004G129500--Sobic002G123600 Sobic002G043000 Sobic002G043000 Sobic004G129500--Sobic002G043000 Sobic001G361200 Sobic001G361200 Sobic004G129500--Sobic001G361200 Sobic006G106600 Sobic006G106600 Sobic001G191900--Sobic006G106600 Sobic001G191900--Sobic001G229300 Sobic001G191900--Sobic004G277400 Sobic002G153400 Sobic002G153400 Sobic001G191900--Sobic002G153400 Sobic007G022700 Sobic007G022700 Sobic001G191900--Sobic007G022700 Sobic001G191900--Sobic007G051400 Sobic009G120400 Sobic009G120400 Sobic001G191900--Sobic009G120400 Sobic004G354100 Sobic004G354100 Sobic001G191900--Sobic004G354100 Sobic001G191900--Sobic002G426100 Sobic002G426100--Sobic009G120400 Sobic008G111600 Sobic008G111600 Sobic002G426100--Sobic008G111600 Sobic006G181800 Sobic006G181800 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic002G426100--Sobic004G129500 Sobic001G467100 Sobic001G467100 Sobic010G172400--Sobic001G467100 Sobic010G172400--Sobic003G222700 Sobic010G172400--Sobic002G399900 Sobic006G091000 Sobic006G091000 Sobic010G172400--Sobic006G091000 Sobic002G182000 Sobic002G182000 Sobic010G172400--Sobic002G182000 Sobic010G172400--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic010G172400--Sobic001G474400 Sobic001G097900 Sobic001G097900 Sobic010G172400--Sobic001G097900 Sobic001G012900 Sobic001G012900 Sobic010G172400--Sobic001G012900 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic006G245700 Sobic006G245700 Sobic004G256300--Sobic006G245700 Sobic004G256300--Sobic007G022700 Sobic004G256300--Sobic001G229300 Sobic004G256300--Sobic002G142700 Sobic001G487100 Sobic001G487100 Sobic004G256300--Sobic001G487100 Sobic004G256300--Sobic001G467100 Sobic003G004600 Sobic003G004600 Sobic004G256300--Sobic003G004600 Sobic009G052100 Sobic009G052100 Sobic001G507200--Sobic009G052100 Sobic009G049200 Sobic009G049200 Sobic001G507200--Sobic009G049200 Sobic006G173200 Sobic006G173200 Sobic001G507200--Sobic006G173200 Sobic004G315700 Sobic004G315700 Sobic001G507200--Sobic004G315700 Sobic006G071628 Sobic006G071628 Sobic001G507200--Sobic006G071628 Sobic001G507200--Sobic001G296800 Sobic001G385400 Sobic001G385400 Sobic001G507200--Sobic001G385400 Sobic008G192700 Sobic008G192700 Sobic001G507200--Sobic008G192700 Sobic001G507200--Sobic002G399900
Octagon: transcription factors


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