Gene annotation
Transcriptome id Sobic.003G259600.3,Sobic.003G259600.2,Sobic.003G259600.4,Sobic.003G259600.5,Sobic.003G259600.6,Sobic.003G259600.1
Synonym ORC4, Sb03g031370, ATORC4
Functional annotation ORC4 - Putative origin recognition complex subunit 4, expressed
UniProt C5XGS6 , A0A1W0VZ01 , A0A1W0VYX3 , A0A1W0VYY1 , A0A1W0VZ09 , A0A1W0VYY4
Pfam PF14629 PF13191 PF14629
Panther DB PTHR12087 PTHR12087:SF0
NCBI CDD KOG2228; Origin recognition complex, subunit 4
KEGG Orthology K02606; origin recognition complex subunit 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01120 : origin recognition complex subunit 4
RAP-DB (Rice) LOC_Os01g49010.2,LOC_Os01g49010.1 : ORC4 - Putative origin recognition complex subunit 4, expressed
MaizeGDB (Corn) Zm00025a028012
Brachypodium -
Barley HORVU3Hr1G063320.34 , HORVU3Hr1G063320.31 , HORVU3Hr1G063320.30 , HORVU3Hr1G063320.33 , HORVU3Hr1G063320.32 , HORVU3Hr1G063320.22 , HORVU3Hr1G063320.23 , HORVU3Hr1G063320.20 , HORVU3Hr1G063320.26 , HORVU3Hr1G063320.27 , HORVU3Hr1G063320.24 , HORVU3Hr1G063320.25 , HORVU3Hr1G063320.28 , HORVU3Hr1G063320.29 , HORVU3Hr1G063320.13 , HORVU3Hr1G063320.6 , HORVU3Hr1G063320.5 , HORVU3Hr1G063320.19 , HORVU3Hr1G063320.11 , HORVU3Hr1G063320.10 , HORVU3Hr1G063320.17 , HORVU3Hr1G063320.16 , HORVU3Hr1G063320.15 , HORVU3Hr1G063320.14 , HORVU3Hr1G063320.9 , HORVU3Hr1G063320.8 , HORVU3Hr1G063320.7
Wheat TraesCS3A02G265500 , TraesCS3A02G265500 , TraesCS3B02G298900 , TraesCS3B02G298900 , TraesCS3D02G265800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
2 Sobic.003G360300 exostosin family domain containing protein, expressed -
3 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
4 Sobic.003G331000 exostosin family domain containing protein, expressed -
5 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160
6 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
8 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
9 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
10 Sobic.006G033101 - K14401: CPSF1, cleavage and polyadenylation specificity factor subunit 1
11 Sobic.002G043000 HEN1, putative, expressed -
12 Sobic.001G033900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
14 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1
15 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
16 Sobic.004G356200 expressed protein -
17 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
18 Sobic.009G104900 - K03348: anaphase-promoting complex subunit 1
19 Sobic.002G254800 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
20 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -


Gene co-expression network
sample Sobic003G259600 Sobic003G259600 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G360300 Sobic003G360300 Sobic003G259600--Sobic003G360300 Sobic001G373000 Sobic001G373000 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic004G038100 Sobic004G038100 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic001G334100 Sobic001G334100 Sobic003G259600--Sobic001G334100 Sobic003G361400--Sobic003G259600 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic003G361400--Sobic004G038100 Sobic001G013300 Sobic001G013300 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G361400--Sobic003G360300 Sobic003G360300--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic003G360300--Sobic001G123600 Sobic003G360300--Sobic010G269300 Sobic007G047600 Sobic007G047600 Sobic003G360300--Sobic007G047600 Sobic006G179300 Sobic006G179300 Sobic003G360300--Sobic006G179300 Sobic003G360300--Sobic002G142700 Sobic004G342300 Sobic004G342300 Sobic003G360300--Sobic004G342300 Sobic004G277400 Sobic004G277400 Sobic003G360300--Sobic004G277400 Sobic008G080500 Sobic008G080500 Sobic003G360300--Sobic008G080500 Sobic009G104900 Sobic009G104900 Sobic001G373000--Sobic009G104900 Sobic001G373000--Sobic004G038100 Sobic002G005000 Sobic002G005000 Sobic001G373000--Sobic002G005000 Sobic001G373000--Sobic003G259600 Sobic001G373000--Sobic003G361400 Sobic010G188000 Sobic010G188000 Sobic001G373000--Sobic010G188000 Sobic002G126800 Sobic002G126800 Sobic001G373000--Sobic002G126800 Sobic001G373000--Sobic001G013300 Sobic005G028100 Sobic005G028100 Sobic001G373000--Sobic005G028100 Sobic003G331000--Sobic003G259600 Sobic009G122900 Sobic009G122900 Sobic003G331000--Sobic009G122900 Sobic003G331000--Sobic003G028400 Sobic002G123600 Sobic002G123600 Sobic003G331000--Sobic002G123600 Sobic003G331000--Sobic001G123600 Sobic001G242300 Sobic001G242300 Sobic003G331000--Sobic001G242300 Sobic005G160200 Sobic005G160200 Sobic003G331000--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic003G331000--Sobic003G298900 Sobic003G331000--Sobic003G360300 Sobic006G033101 Sobic006G033101 Sobic004G038100--Sobic006G033101 Sobic006G181800 Sobic006G181800 Sobic004G038100--Sobic006G181800 Sobic004G038100--Sobic001G373000 Sobic004G215900 Sobic004G215900 Sobic004G038100--Sobic004G215900 Sobic004G038100--Sobic010G188000 Sobic004G038100--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic004G038100--Sobic001G373800 Sobic006G280100 Sobic006G280100 Sobic004G038100--Sobic006G280100 Sobic004G038100--Sobic009G104900 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic010G269300--Sobic001G123600 Sobic010G269300--Sobic003G360300 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic004G129500 Sobic004G129500 Sobic003G028400--Sobic004G129500 Sobic003G028400--Sobic003G331000 Sobic003G028400--Sobic003G259600 Sobic003G028400--Sobic001G123600 Sobic007G031300 Sobic007G031300 Sobic003G028400--Sobic007G031300 Sobic003G028400--Sobic002G123600 Sobic001G465500 Sobic001G465500 Sobic003G028400--Sobic001G465500 Sobic007G030600 Sobic007G030600 Sobic003G028400--Sobic007G030600 Sobic003G028400--Sobic001G242300 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G208400 Sobic002G208400 Sobic002G142700--Sobic002G208400 Sobic004G256300 Sobic004G256300 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic003G222700 Sobic003G222700 Sobic002G142700--Sobic003G222700 Sobic001G229300 Sobic001G229300 Sobic002G142700--Sobic001G229300 Sobic002G142700--Sobic001G373000 Sobic002G142700--Sobic003G360300 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300
Octagon: transcription factors


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