Gene annotation
Transcriptome id Sobic.001G229300.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKH8
Pfam PF01693 PF13456
Panther DB PTHR33033 PTHR33033:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G01410 : Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RAP-DB (Rice) ChrSy.fgenesh.mRNA.22 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ96964 , KQJ96965
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
2 Sobic.003G129300 uridine kinase, putative, expressed -
3 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
4 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
5 Sobic.003G010900 expressed protein -
6 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
7 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
8 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
9 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
10 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
11 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
12 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
13 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
14 Sobic.004G277400 glucosyltransferase, putative, expressed K03849: alpha-1,3-glucosyltransferase
15 Sobic.005G087300 protein kinase family protein, putative, expressed -
16 Sobic.004G020100 division protein, putative, expressed -
17 Sobic.009G120400 methyltransferase, putative, expressed -
18 Sobic.010G065600 expressed protein -
19 Sobic.003G023200 DNA repair protein Rad51, putative, expressed K10870: RAD51L2, RAD51-like protein 2
20 Sobic.004G129500 expressed protein -


Gene co-expression network
sample Sobic001G229300 Sobic001G229300 Sobic001G123600 Sobic001G123600 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic003G010900 Sobic003G010900 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic006G191200 Sobic006G191200 Sobic001G123600--Sobic006G191200 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic007G034200 Sobic007G034200 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic009G120400 Sobic009G120400 Sobic001G123600--Sobic009G120400 Sobic003G299500 Sobic003G299500 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic003G129300--Sobic001G229300 Sobic003G129300--Sobic001G123600 Sobic003G129300--Sobic002G142700 Sobic010G065600 Sobic010G065600 Sobic003G129300--Sobic010G065600 Sobic002G208400 Sobic002G208400 Sobic003G129300--Sobic002G208400 Sobic009G063800 Sobic009G063800 Sobic003G129300--Sobic009G063800 Sobic003G119900 Sobic003G119900 Sobic003G129300--Sobic003G119900 Sobic001G191900 Sobic001G191900 Sobic003G129300--Sobic001G191900 Sobic001G465500 Sobic001G465500 Sobic003G129300--Sobic001G465500 Sobic004G354100--Sobic001G229300 Sobic003G085500 Sobic003G085500 Sobic004G354100--Sobic003G085500 Sobic010G002800 Sobic010G002800 Sobic004G354100--Sobic010G002800 Sobic004G354100--Sobic001G191900 Sobic004G354100--Sobic004G256300 Sobic007G022700 Sobic007G022700 Sobic004G354100--Sobic007G022700 Sobic001G203500 Sobic001G203500 Sobic004G354100--Sobic001G203500 Sobic002G153400 Sobic002G153400 Sobic004G354100--Sobic002G153400 Sobic001G485300 Sobic001G485300 Sobic004G354100--Sobic001G485300 Sobic003G221500 Sobic003G221500 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic006G245700 Sobic006G245700 Sobic004G256300--Sobic006G245700 Sobic004G256300--Sobic007G022700 Sobic004G256300--Sobic001G229300 Sobic004G256300--Sobic002G142700 Sobic001G487100 Sobic001G487100 Sobic004G256300--Sobic001G487100 Sobic001G467100 Sobic001G467100 Sobic004G256300--Sobic001G467100 Sobic003G004600 Sobic003G004600 Sobic004G256300--Sobic003G004600 Sobic001G051400 Sobic001G051400 Sobic003G010900--Sobic001G051400 Sobic004G145600 Sobic004G145600 Sobic003G010900--Sobic004G145600 Sobic003G010900--Sobic002G066800 Sobic007G016900 Sobic007G016900 Sobic003G010900--Sobic007G016900 Sobic003G010900--Sobic001G123600 Sobic004G084400 Sobic004G084400 Sobic003G010900--Sobic004G084400 Sobic003G010900--Sobic001G229300 Sobic003G432800 Sobic003G432800 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic002G066800--Sobic001G051400 Sobic005G087300 Sobic005G087300 Sobic002G066800--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic002G066800--Sobic002G078100 Sobic003G393200 Sobic003G393200 Sobic002G066800--Sobic003G393200 Sobic010G038900 Sobic010G038900 Sobic002G066800--Sobic010G038900 Sobic010G018900 Sobic010G018900 Sobic002G066800--Sobic010G018900 Sobic002G066800--Sobic003G010900 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic003G222700--Sobic004G256300 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic003G222700--Sobic001G229300 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G142700--Sobic002G208400 Sobic002G142700--Sobic004G256300 Sobic002G142700--Sobic003G221500 Sobic002G142700--Sobic003G222700 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic002G142700--Sobic003G360300 Sobic004G000400 Sobic004G000400 Sobic006G106600--Sobic004G000400 Sobic002G173400 Sobic002G173400 Sobic006G106600--Sobic002G173400 Sobic007G186400 Sobic007G186400 Sobic006G106600--Sobic007G186400 Sobic004G215600 Sobic004G215600 Sobic006G106600--Sobic004G215600 Sobic006G106600--Sobic001G229300 Sobic006G106600--Sobic001G191900 Sobic002G271400 Sobic002G271400 Sobic006G106600--Sobic002G271400 Sobic010G030000 Sobic010G030000 Sobic006G106600--Sobic010G030000 Sobic008G131900 Sobic008G131900 Sobic006G106600--Sobic008G131900
Octagon: transcription factors


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