Gene annotation
Transcriptome id Sobic.003G129300.2,Sobic.003G129300.1
Synonym Sb03g011000
Functional annotation uridine kinase, putative, expressed
UniProt C5XH81
Pfam PF01928 PF00485
Panther DB PTHR10285 PTHR10285:SF76
NCBI CDD KOG4203; Armadillo/beta-Catenin/plakoglobin
KEGG Orthology -
Gene Ontology GO:0016301; kinase activity GO:0008152metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G26190 : Phosphoribulokinase / Uridine kinase family
RAP-DB (Rice) LOC_Os02g47860.2 : uridine kinase, putative, expressed
MaizeGDB (Corn) Zm00025a021745
Brachypodium KQK00959 , KQJ92235 , PNT69291
Barley HORVU6Hr1G069280.5 , HORVU6Hr1G069280.4 , HORVU6Hr1G069280.8 , HORVU6Hr1G069280.3 , HORVU6Hr1G069280.2 , HORVU6Hr1G069280.1 , HORVU6Hr1G069280.7 , HORVU6Hr1G069280.6 , HORVU6Hr1G069280.13 , HORVU6Hr1G069280.12 , HORVU6Hr1G069280.11 , HORVU6Hr1G069280.10 , HORVU6Hr1G069280.14 , HORVU6Hr1G069280.9
Wheat TraesCS6A02G274300 , TraesCS6A02G274300 , TraesCS6B02G301800 , TraesCS6D02G254500
Populus PNT00564 , PNT16342 , PNT00565 , PNT23993 , PNT23992 , PNT23991


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G229300 expressed protein -
2 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
3 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
4 Sobic.010G065600 expressed protein -
5 Sobic.002G208400 regulator protein, putative, expressed -
6 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
7 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
8 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
9 Sobic.001G465500 radical SAM enzyme, putative, expressed -
10 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
11 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
12 Sobic.004G030400 expressed protein -
13 Sobic.003G023200 DNA repair protein Rad51, putative, expressed K10870: RAD51L2, RAD51-like protein 2
14 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
15 Sobic.003G010900 expressed protein -
16 Sobic.003G326500 apurinic endonuclease-redox protein, putative, expressed K01142: E3.1.11.2, exodeoxyribonuclease III
17 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
18 Sobic.003G122800 translin, putative, expressed -
19 Sobic.007G194500 ribosomal protein L22, putative, expressed K02880: RP-L17e, large subunit ribosomal protein L17e
20 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial


Gene co-expression network
sample Sobic003G129300 Sobic003G129300 Sobic001G229300 Sobic001G229300 Sobic003G129300--Sobic001G229300 Sobic001G123600 Sobic001G123600 Sobic003G129300--Sobic001G123600 Sobic002G142700 Sobic002G142700 Sobic003G129300--Sobic002G142700 Sobic010G065600 Sobic010G065600 Sobic003G129300--Sobic010G065600 Sobic002G208400 Sobic002G208400 Sobic003G129300--Sobic002G208400 Sobic009G063800 Sobic009G063800 Sobic003G129300--Sobic009G063800 Sobic003G119900 Sobic003G119900 Sobic003G129300--Sobic003G119900 Sobic001G191900 Sobic001G191900 Sobic003G129300--Sobic001G191900 Sobic001G465500 Sobic001G465500 Sobic003G129300--Sobic001G465500 Sobic001G229300--Sobic001G123600 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic003G010900 Sobic003G010900 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic006G191200 Sobic006G191200 Sobic001G123600--Sobic006G191200 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic007G034200 Sobic007G034200 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic009G120400 Sobic009G120400 Sobic001G123600--Sobic009G120400 Sobic003G299500 Sobic003G299500 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G142700--Sobic002G208400 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic002G142700--Sobic003G222700 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic002G142700--Sobic003G360300 Sobic010G065600--Sobic003G129300 Sobic010G065600--Sobic001G229300 Sobic010G065600--Sobic001G123600 Sobic003G023200 Sobic003G023200 Sobic010G065600--Sobic003G023200 Sobic010G065600--Sobic003G222700 Sobic010G065600--Sobic009G063800 Sobic010G235700 Sobic010G235700 Sobic010G065600--Sobic010G235700 Sobic002G239601 Sobic002G239601 Sobic010G065600--Sobic002G239601 Sobic010G065600--Sobic002G208400 Sobic002G208400--Sobic002G142700 Sobic001G115500 Sobic001G115500 Sobic002G208400--Sobic001G115500 Sobic009G113100 Sobic009G113100 Sobic002G208400--Sobic009G113100 Sobic006G032600 Sobic006G032600 Sobic002G208400--Sobic006G032600 Sobic003G008600 Sobic003G008600 Sobic002G208400--Sobic003G008600 Sobic004G030400 Sobic004G030400 Sobic002G208400--Sobic004G030400 Sobic003G259600 Sobic003G259600 Sobic002G208400--Sobic003G259600 Sobic002G208400--Sobic001G123600 Sobic002G208400--Sobic003G129300 Sobic002G182000 Sobic002G182000 Sobic009G063800--Sobic002G182000 Sobic010G250000 Sobic010G250000 Sobic009G063800--Sobic010G250000 Sobic007G146600 Sobic007G146600 Sobic009G063800--Sobic007G146600 Sobic001G309200 Sobic001G309200 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic010G018900 Sobic010G018900 Sobic009G063800--Sobic010G018900 Sobic001G203600 Sobic001G203600 Sobic009G063800--Sobic001G203600 Sobic002G348400 Sobic002G348400 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500 Sobic004G014100 Sobic004G014100 Sobic003G119900--Sobic004G014100 Sobic008G174500 Sobic008G174500 Sobic003G119900--Sobic008G174500 Sobic003G119900--Sobic003G129300 Sobic007G167800 Sobic007G167800 Sobic003G119900--Sobic007G167800 Sobic010G152000 Sobic010G152000 Sobic003G119900--Sobic010G152000 Sobic006G127200 Sobic006G127200 Sobic003G119900--Sobic006G127200 Sobic008G160600 Sobic008G160600 Sobic003G119900--Sobic008G160600 Sobic003G217500 Sobic003G217500 Sobic003G119900--Sobic003G217500 Sobic010G223500 Sobic010G223500 Sobic003G119900--Sobic010G223500 Sobic001G191900--Sobic006G106600 Sobic001G191900--Sobic001G229300 Sobic004G277400 Sobic004G277400 Sobic001G191900--Sobic004G277400 Sobic002G153400 Sobic002G153400 Sobic001G191900--Sobic002G153400 Sobic007G022700 Sobic007G022700 Sobic001G191900--Sobic007G022700 Sobic001G191900--Sobic007G051400 Sobic001G191900--Sobic009G120400 Sobic001G191900--Sobic004G354100 Sobic002G426100 Sobic002G426100 Sobic001G191900--Sobic002G426100 Sobic008G078000 Sobic008G078000 Sobic001G465500--Sobic008G078000 Sobic002G335500 Sobic002G335500 Sobic001G465500--Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic001G465500--Sobic004G078500 Sobic003G028400 Sobic003G028400 Sobic001G465500--Sobic003G028400 Sobic001G465500--Sobic002G208400 Sobic001G465500--Sobic004G030400 Sobic003G331000 Sobic003G331000 Sobic001G465500--Sobic003G331000 Sobic001G465500--Sobic003G129300 Sobic001G436300 Sobic001G436300 Sobic001G465500--Sobic001G436300
Octagon: transcription factors


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