Gene annotation
Transcriptome id Sobic.003G010900.4,Sobic.003G010900.5,Sobic.003G010900.6,Sobic.003G010900.3,Sobic.003G010900.1,Sobic.003G010900.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VVE7 , A0A1W0VVC4 , A0A1B6Q0V7
Pfam PF16021
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46200 : -
RAP-DB (Rice) LOC_Os01g12670.4,LOC_Os01g12670.2,LOC_Os01g12670.5,LOC_Os01g12670.1 : expressed protein
MaizeGDB (Corn) Zm00025a058136 , Zm00025a036807 , Zm00025a035968 , Zm00025a009845
Brachypodium KQK03383 , KQK03382 , KQK03385 , KQK03384 , PNT70197 , PNT70196 , PNT70195
Barley -
Wheat TraesCS3D02G159300 , TraesCS3D02G159300 , TraesCS3D02G159300 , TraesCS3B02G178300 , TraesCS3A02G151700 , TraesCS3A02G151700
Populus -


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cDNA sequences
Sobic.003G010900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
2 Sobic.004G145600 expressed protein -
3 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
4 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
5 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
6 Sobic.004G084400 methyltransferase domain containing protein, expressed K14850: ribosomal RNA-processing protein 8
7 Sobic.001G229300 expressed protein -
8 Sobic.003G432800 CRS1/YhbY domain containing protein, putative, expressed -
9 Sobic.002G381900 expressed protein -
10 Sobic.003G393200 expressed protein -
11 Sobic.004G020100 division protein, putative, expressed -
12 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
13 Sobic.009G059400 expressed protein -
14 Sobic.003G113300 expressed protein -
15 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
16 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
17 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
18 Sobic.005G123400 expressed protein -
19 Sobic.010G038900 expressed protein -
20 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -


Gene co-expression network
sample Sobic003G010900 Sobic003G010900 Sobic001G051400 Sobic001G051400 Sobic003G010900--Sobic001G051400 Sobic004G145600 Sobic004G145600 Sobic003G010900--Sobic004G145600 Sobic002G066800 Sobic002G066800 Sobic003G010900--Sobic002G066800 Sobic007G016900 Sobic007G016900 Sobic003G010900--Sobic007G016900 Sobic001G123600 Sobic001G123600 Sobic003G010900--Sobic001G123600 Sobic004G084400 Sobic004G084400 Sobic003G010900--Sobic004G084400 Sobic001G229300 Sobic001G229300 Sobic003G010900--Sobic001G229300 Sobic003G432800 Sobic003G432800 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic001G051400--Sobic002G066800 Sobic007G034200 Sobic007G034200 Sobic001G051400--Sobic007G034200 Sobic003G393200 Sobic003G393200 Sobic001G051400--Sobic003G393200 Sobic001G051400--Sobic003G010900 Sobic009G120400 Sobic009G120400 Sobic001G051400--Sobic009G120400 Sobic006G191200 Sobic006G191200 Sobic001G051400--Sobic006G191200 Sobic005G087300 Sobic005G087300 Sobic001G051400--Sobic005G087300 Sobic002G078100 Sobic002G078100 Sobic001G051400--Sobic002G078100 Sobic005G123400 Sobic005G123400 Sobic001G051400--Sobic005G123400 Sobic007G036800 Sobic007G036800 Sobic004G145600--Sobic007G036800 Sobic004G145600--Sobic003G010900 Sobic004G145600--Sobic004G084400 Sobic003G005900 Sobic003G005900 Sobic004G145600--Sobic003G005900 Sobic005G040900 Sobic005G040900 Sobic004G145600--Sobic005G040900 Sobic003G062400 Sobic003G062400 Sobic004G145600--Sobic003G062400 Sobic007G148400 Sobic007G148400 Sobic004G145600--Sobic007G148400 Sobic003G222700 Sobic003G222700 Sobic004G145600--Sobic003G222700 Sobic010G059700 Sobic010G059700 Sobic004G145600--Sobic010G059700 Sobic002G066800--Sobic001G051400 Sobic002G066800--Sobic005G087300 Sobic002G066800--Sobic002G078100 Sobic002G066800--Sobic003G393200 Sobic010G038900 Sobic010G038900 Sobic002G066800--Sobic010G038900 Sobic010G018900 Sobic010G018900 Sobic002G066800--Sobic010G018900 Sobic002G066800--Sobic003G010900 Sobic002G066800--Sobic006G191200 Sobic003G023200 Sobic003G023200 Sobic002G066800--Sobic003G023200 Sobic006G245900 Sobic006G245900 Sobic007G016900--Sobic006G245900 Sobic007G187600 Sobic007G187600 Sobic007G016900--Sobic007G187600 Sobic003G413100 Sobic003G413100 Sobic007G016900--Sobic003G413100 Sobic007G016900--Sobic003G010900 Sobic004G345400 Sobic004G345400 Sobic007G016900--Sobic004G345400 Sobic001G042200 Sobic001G042200 Sobic007G016900--Sobic001G042200 Sobic002G343200 Sobic002G343200 Sobic007G016900--Sobic002G343200 Sobic003G113300 Sobic003G113300 Sobic007G016900--Sobic003G113300 Sobic009G040800 Sobic009G040800 Sobic007G016900--Sobic009G040800 Sobic001G123600--Sobic006G191200 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic010G269300 Sobic010G269300 Sobic001G123600--Sobic010G269300 Sobic001G123600--Sobic009G120400 Sobic003G299500 Sobic003G299500 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic004G084400--Sobic002G381900 Sobic004G084400--Sobic003G010900 Sobic004G084400--Sobic004G345400 Sobic009G059400 Sobic009G059400 Sobic004G084400--Sobic009G059400 Sobic009G199500 Sobic009G199500 Sobic004G084400--Sobic009G199500 Sobic004G084400--Sobic004G145600 Sobic004G084400--Sobic003G113300 Sobic004G084400--Sobic007G016900 Sobic004G084400--Sobic003G222700 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic001G229300--Sobic003G010900 Sobic001G229300--Sobic002G066800 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic002G076500 Sobic002G076500 Sobic003G432800--Sobic002G076500 Sobic003G432800--Sobic003G010900 Sobic006G112500 Sobic006G112500 Sobic003G432800--Sobic006G112500 Sobic003G432800--Sobic001G051400 Sobic003G432800--Sobic006G191200 Sobic003G432800--Sobic002G381900 Sobic002G342300 Sobic002G342300 Sobic003G432800--Sobic002G342300 Sobic003G432800--Sobic001G123600 Sobic003G432800--Sobic003G113300 Sobic002G381900--Sobic004G084400 Sobic001G308400 Sobic001G308400 Sobic002G381900--Sobic001G308400 Sobic002G381900--Sobic003G010900 Sobic003G256800 Sobic003G256800 Sobic002G381900--Sobic003G256800 Sobic002G381900--Sobic006G191200 Sobic005G114500 Sobic005G114500 Sobic002G381900--Sobic005G114500 Sobic009G254100 Sobic009G254100 Sobic002G381900--Sobic009G254100 Sobic002G381900--Sobic003G299500 Sobic004G031300 Sobic004G031300 Sobic002G381900--Sobic004G031300
Octagon: transcription factors


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