Gene annotation
Transcriptome id Sobic.004G145600.1
Synonym Sb04g018970
Functional annotation expressed protein
UniProt C5XRQ2
Pfam -
Panther DB PTHR36031 PTHR36031:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07440 : -
RAP-DB (Rice) LOC_Os02g27740.1 : expressed protein
MaizeGDB (Corn) Zm00025a020334
Brachypodium KQJ99487 , KQJ99488
Barley HORVU1Hr1G058580.1 , HORVU1Hr1G058580.2
Wheat TraesCS1B02G244400 , TraesCS1B02G244400 , TraesCS1D02G232300 , TraesCS1D02G232300 , TraesCS1A02G229700 , TraesCS1A02G229700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G036800 xylosyltransferase, putative, expressed -
2 Sobic.003G010900 expressed protein -
3 Sobic.004G084400 methyltransferase domain containing protein, expressed K14850: ribosomal RNA-processing protein 8
4 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
5 Sobic.005G040900 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
6 Sobic.003G062400 PHD finger protein, putative, expressed -
7 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
8 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
9 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
10 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
11 Sobic.009G059400 expressed protein -
12 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
13 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
14 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
15 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
16 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
17 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
18 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
19 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
20 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova


Gene co-expression network
sample Sobic004G145600 Sobic004G145600 Sobic007G036800 Sobic007G036800 Sobic004G145600--Sobic007G036800 Sobic003G010900 Sobic003G010900 Sobic004G145600--Sobic003G010900 Sobic004G084400 Sobic004G084400 Sobic004G145600--Sobic004G084400 Sobic003G005900 Sobic003G005900 Sobic004G145600--Sobic003G005900 Sobic005G040900 Sobic005G040900 Sobic004G145600--Sobic005G040900 Sobic003G062400 Sobic003G062400 Sobic004G145600--Sobic003G062400 Sobic007G148400 Sobic007G148400 Sobic004G145600--Sobic007G148400 Sobic003G222700 Sobic003G222700 Sobic004G145600--Sobic003G222700 Sobic010G059700 Sobic010G059700 Sobic004G145600--Sobic010G059700 Sobic004G129500 Sobic004G129500 Sobic007G036800--Sobic004G129500 Sobic010G103500 Sobic010G103500 Sobic007G036800--Sobic010G103500 Sobic007G036800--Sobic004G145600 Sobic008G112100 Sobic008G112100 Sobic007G036800--Sobic008G112100 Sobic007G036800--Sobic010G059700 Sobic007G010200 Sobic007G010200 Sobic007G036800--Sobic007G010200 Sobic004G350200 Sobic004G350200 Sobic007G036800--Sobic004G350200 Sobic002G123600 Sobic002G123600 Sobic007G036800--Sobic002G123600 Sobic004G256300 Sobic004G256300 Sobic007G036800--Sobic004G256300 Sobic001G051400 Sobic001G051400 Sobic003G010900--Sobic001G051400 Sobic003G010900--Sobic004G145600 Sobic002G066800 Sobic002G066800 Sobic003G010900--Sobic002G066800 Sobic007G016900 Sobic007G016900 Sobic003G010900--Sobic007G016900 Sobic001G123600 Sobic001G123600 Sobic003G010900--Sobic001G123600 Sobic003G010900--Sobic004G084400 Sobic001G229300 Sobic001G229300 Sobic003G010900--Sobic001G229300 Sobic003G432800 Sobic003G432800 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic004G084400--Sobic002G381900 Sobic004G084400--Sobic003G010900 Sobic004G345400 Sobic004G345400 Sobic004G084400--Sobic004G345400 Sobic009G059400 Sobic009G059400 Sobic004G084400--Sobic009G059400 Sobic009G199500 Sobic009G199500 Sobic004G084400--Sobic009G199500 Sobic004G084400--Sobic004G145600 Sobic003G113300 Sobic003G113300 Sobic004G084400--Sobic003G113300 Sobic004G084400--Sobic007G016900 Sobic004G084400--Sobic003G222700 Sobic005G114500 Sobic005G114500 Sobic003G005900--Sobic005G114500 Sobic003G130900 Sobic003G130900 Sobic003G005900--Sobic003G130900 Sobic006G265600 Sobic006G265600 Sobic003G005900--Sobic006G265600 Sobic003G293000 Sobic003G293000 Sobic003G005900--Sobic003G293000 Sobic001G474400 Sobic001G474400 Sobic003G005900--Sobic001G474400 Sobic004G151200 Sobic004G151200 Sobic003G005900--Sobic004G151200 Sobic001G012900 Sobic001G012900 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic009G207200 Sobic009G207200 Sobic003G005900--Sobic009G207200 Sobic009G040800 Sobic009G040800 Sobic005G040900--Sobic009G040800 Sobic006G091000 Sobic006G091000 Sobic005G040900--Sobic006G091000 Sobic004G347100 Sobic004G347100 Sobic005G040900--Sobic004G347100 Sobic007G139400 Sobic007G139400 Sobic005G040900--Sobic007G139400 Sobic010G074900 Sobic010G074900 Sobic005G040900--Sobic010G074900 Sobic003G205501 Sobic003G205501 Sobic005G040900--Sobic003G205501 Sobic005G040900--Sobic004G345400 Sobic001G472100 Sobic001G472100 Sobic005G040900--Sobic001G472100 Sobic009G129600 Sobic009G129600 Sobic005G040900--Sobic009G129600 Sobic003G253400 Sobic003G253400 Sobic003G062400--Sobic003G253400 Sobic008G160500 Sobic008G160500 Sobic003G062400--Sobic008G160500 Sobic003G062400--Sobic004G145600 Sobic003G038600 Sobic003G038600 Sobic003G062400--Sobic003G038600 Sobic001G005600 Sobic001G005600 Sobic003G062400--Sobic001G005600 Sobic004G068500 Sobic004G068500 Sobic003G062400--Sobic004G068500 Sobic009G125000 Sobic009G125000 Sobic003G062400--Sobic009G125000 Sobic002G267400 Sobic002G267400 Sobic003G062400--Sobic002G267400 Sobic002G357900 Sobic002G357900 Sobic003G062400--Sobic002G357900 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic003G222700--Sobic004G256300 Sobic001G467100 Sobic001G467100 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic007G022700 Sobic007G022700 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic010G059700--Sobic007G036800 Sobic002G306600 Sobic002G306600 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic003G224300 Sobic003G224300 Sobic010G059700--Sobic003G224300 Sobic010G059700--Sobic007G146600 Sobic010G059700--Sobic003G222700 Sobic003G148900 Sobic003G148900 Sobic010G059700--Sobic003G148900 Sobic010G059700--Sobic004G145600 Sobic010G059700--Sobic007G022700
Octagon: transcription factors


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