Gene annotation
Transcriptome id Sobic.002G267400.1
Synonym Sb02g030140, POLD4
Functional annotation POLD4A - Putative DNA polymerase delta complex subunit, expressed
UniProt C5X609
Pfam PF04081
Panther DB PTHR14303
NCBI CDD -
KEGG Orthology K03505; DNA polymerase delta subunit 4
Gene Ontology GO:0006260; DNA replication GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G09815 : polymerase delta 4
RAP-DB (Rice) LOC_Os09g34850.3 : POLD4A - Putative DNA polymerase delta complex subunit, expressed
MaizeGDB (Corn) Zm00025a047658
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
2 Sobic.002G059000 OsFBX237 - F-box domain containing protein, expressed -
3 Sobic.002G357900 expressed protein -
4 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
5 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -
6 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
7 Sobic.003G062400 PHD finger protein, putative, expressed -
8 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
9 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
10 Sobic.008G111700 expressed protein -
11 Sobic.006G049100 expressed protein -
12 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
13 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
14 Sobic.004G145600 expressed protein -
15 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
16 Sobic.006G120800 transglutaminase, putative, expressed -
17 Sobic.009G059400 expressed protein -
18 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
19 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
20 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7


Gene co-expression network
sample Sobic002G267400 Sobic002G267400 Sobic003G148900 Sobic003G148900 Sobic002G267400--Sobic003G148900 Sobic002G059000 Sobic002G059000 Sobic002G267400--Sobic002G059000 Sobic002G357900 Sobic002G357900 Sobic002G267400--Sobic002G357900 Sobic007G192100 Sobic007G192100 Sobic002G267400--Sobic007G192100 Sobic001G036700 Sobic001G036700 Sobic002G267400--Sobic001G036700 Sobic008G111800 Sobic008G111800 Sobic002G267400--Sobic008G111800 Sobic003G062400 Sobic003G062400 Sobic002G267400--Sobic003G062400 Sobic004G256300 Sobic004G256300 Sobic002G267400--Sobic004G256300 Sobic007G081900 Sobic007G081900 Sobic002G267400--Sobic007G081900 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic007G117800 Sobic007G117800 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic002G059000--Sobic002G267400 Sobic007G148400 Sobic007G148400 Sobic002G059000--Sobic007G148400 Sobic004G241600 Sobic004G241600 Sobic002G059000--Sobic004G241600 Sobic002G059000--Sobic007G192100 Sobic002G059000--Sobic003G148900 Sobic007G146600 Sobic007G146600 Sobic002G059000--Sobic007G146600 Sobic009G086200 Sobic009G086200 Sobic002G059000--Sobic009G086200 Sobic002G399500 Sobic002G399500 Sobic002G059000--Sobic002G399500 Sobic002G059000--Sobic007G117800 Sobic004G337300 Sobic004G337300 Sobic002G357900--Sobic004G337300 Sobic002G357900--Sobic003G148900 Sobic003G222700 Sobic003G222700 Sobic002G357900--Sobic003G222700 Sobic001G061200 Sobic001G061200 Sobic002G357900--Sobic001G061200 Sobic002G357900--Sobic002G267400 Sobic008G140400 Sobic008G140400 Sobic002G357900--Sobic008G140400 Sobic002G357900--Sobic003G062400 Sobic003G038600 Sobic003G038600 Sobic002G357900--Sobic003G038600 Sobic002G029300 Sobic002G029300 Sobic002G357900--Sobic002G029300 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic007G192100--Sobic002G399500 Sobic007G192100--Sobic007G117800 Sobic001G532100 Sobic001G532100 Sobic001G036700--Sobic001G532100 Sobic001G036700--Sobic002G176400 Sobic001G036700--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic001G036700--Sobic001G285300 Sobic006G094600 Sobic006G094600 Sobic001G036700--Sobic006G094600 Sobic001G036700--Sobic001G126200 Sobic003G131300 Sobic003G131300 Sobic001G036700--Sobic003G131300 Sobic003G420700 Sobic003G420700 Sobic001G036700--Sobic003G420700 Sobic001G036700--Sobic009G086200 Sobic009G059400 Sobic009G059400 Sobic008G111800--Sobic009G059400 Sobic003G365700 Sobic003G365700 Sobic008G111800--Sobic003G365700 Sobic005G198200 Sobic005G198200 Sobic008G111800--Sobic005G198200 Sobic007G218600 Sobic007G218600 Sobic008G111800--Sobic007G218600 Sobic008G111800--Sobic007G148400 Sobic009G137900 Sobic009G137900 Sobic008G111800--Sobic009G137900 Sobic009G186700 Sobic009G186700 Sobic008G111800--Sobic009G186700 Sobic009G017200 Sobic009G017200 Sobic008G111800--Sobic009G017200 Sobic001G025700 Sobic001G025700 Sobic008G111800--Sobic001G025700 Sobic003G253400 Sobic003G253400 Sobic003G062400--Sobic003G253400 Sobic008G160500 Sobic008G160500 Sobic003G062400--Sobic008G160500 Sobic004G145600 Sobic004G145600 Sobic003G062400--Sobic004G145600 Sobic003G062400--Sobic003G038600 Sobic001G005600 Sobic001G005600 Sobic003G062400--Sobic001G005600 Sobic004G068500 Sobic004G068500 Sobic003G062400--Sobic004G068500 Sobic009G125000 Sobic009G125000 Sobic003G062400--Sobic009G125000 Sobic003G062400--Sobic002G267400 Sobic003G062400--Sobic002G357900 Sobic003G221500 Sobic003G221500 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic006G245700 Sobic006G245700 Sobic004G256300--Sobic006G245700 Sobic007G022700 Sobic007G022700 Sobic004G256300--Sobic007G022700 Sobic001G229300 Sobic001G229300 Sobic004G256300--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic004G256300--Sobic002G142700 Sobic001G487100 Sobic001G487100 Sobic004G256300--Sobic001G487100 Sobic001G467100 Sobic001G467100 Sobic004G256300--Sobic001G467100 Sobic003G004600 Sobic003G004600 Sobic004G256300--Sobic003G004600 Sobic003G006200 Sobic003G006200 Sobic007G081900--Sobic003G006200 Sobic007G081900--Sobic002G267400 Sobic010G235700 Sobic010G235700 Sobic007G081900--Sobic010G235700 Sobic004G207100 Sobic004G207100 Sobic007G081900--Sobic004G207100 Sobic004G320100 Sobic004G320100 Sobic007G081900--Sobic004G320100 Sobic002G374200 Sobic002G374200 Sobic007G081900--Sobic002G374200 Sobic007G081900--Sobic003G004600 Sobic010G154000 Sobic010G154000 Sobic007G081900--Sobic010G154000 Sobic007G081900--Sobic008G160500
Octagon: transcription factors


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