Gene annotation
Transcriptome id Sobic.002G357900.1
Synonym Sb02g037900
Functional annotation expressed protein
UniProt C5XD32
Pfam PF03407
Panther DB PTHR10994 PTHR10994:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19360 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os07g39840.1 : expressed protein
MaizeGDB (Corn) Zm00025a015053 , Zm00025a048578
Brachypodium KQK15470
Barley HORVU0Hr1G003040.2 , HORVU0Hr1G003040.1 , HORVU2Hr1G035750.4 , HORVU2Hr1G035750.1 , HORVU2Hr1G035750.2 , HORVU2Hr1G035750.3
Wheat TraesCS2A02G192700 , TraesCS2B02G214700 , TraesCS2D02G194700
Populus PNT49514


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cDNA sequences
Sobic.002G357900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G337300 expressed protein -
2 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
3 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
4 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
5 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
6 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
7 Sobic.003G062400 PHD finger protein, putative, expressed -
8 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
9 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
12 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
13 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
15 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
16 Sobic.001G023100 ACBP4, putative, expressed -
17 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
18 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
19 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
20 Sobic.002G422400 adenylate cyclase family protein, expressed -


Gene co-expression network
sample Sobic002G357900 Sobic002G357900 Sobic004G337300 Sobic004G337300 Sobic002G357900--Sobic004G337300 Sobic003G148900 Sobic003G148900 Sobic002G357900--Sobic003G148900 Sobic003G222700 Sobic003G222700 Sobic002G357900--Sobic003G222700 Sobic001G061200 Sobic001G061200 Sobic002G357900--Sobic001G061200 Sobic002G267400 Sobic002G267400 Sobic002G357900--Sobic002G267400 Sobic008G140400 Sobic008G140400 Sobic002G357900--Sobic008G140400 Sobic003G062400 Sobic003G062400 Sobic002G357900--Sobic003G062400 Sobic003G038600 Sobic003G038600 Sobic002G357900--Sobic003G038600 Sobic002G029300 Sobic002G029300 Sobic002G357900--Sobic002G029300 Sobic004G337300--Sobic002G357900 Sobic001G050400 Sobic001G050400 Sobic004G337300--Sobic001G050400 Sobic004G337300--Sobic001G061200 Sobic003G190600 Sobic003G190600 Sobic004G337300--Sobic003G190600 Sobic004G337300--Sobic008G140400 Sobic002G401700 Sobic002G401700 Sobic004G337300--Sobic002G401700 Sobic003G006200 Sobic003G006200 Sobic004G337300--Sobic003G006200 Sobic004G337300--Sobic002G267400 Sobic001G005600 Sobic001G005600 Sobic004G337300--Sobic001G005600 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic007G117800 Sobic007G117800 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic004G256300 Sobic004G256300 Sobic003G222700--Sobic004G256300 Sobic001G467100 Sobic001G467100 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic003G222700--Sobic001G061200 Sobic007G022700 Sobic007G022700 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic001G229300 Sobic001G229300 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic001G061200--Sobic007G173700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic001G061200--Sobic002G029300 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic002G267400--Sobic003G148900 Sobic002G059000 Sobic002G059000 Sobic002G267400--Sobic002G059000 Sobic002G267400--Sobic002G357900 Sobic007G192100 Sobic007G192100 Sobic002G267400--Sobic007G192100 Sobic001G036700 Sobic001G036700 Sobic002G267400--Sobic001G036700 Sobic008G111800 Sobic008G111800 Sobic002G267400--Sobic008G111800 Sobic002G267400--Sobic003G062400 Sobic002G267400--Sobic004G256300 Sobic007G081900 Sobic007G081900 Sobic002G267400--Sobic007G081900 Sobic008G140400--Sobic001G005600 Sobic008G140400--Sobic007G173700 Sobic006G222500 Sobic006G222500 Sobic008G140400--Sobic006G222500 Sobic001G122000 Sobic001G122000 Sobic008G140400--Sobic001G122000 Sobic008G140400--Sobic001G023100 Sobic002G419000 Sobic002G419000 Sobic008G140400--Sobic002G419000 Sobic008G140400--Sobic002G357900 Sobic008G140400--Sobic001G193100 Sobic003G199500 Sobic003G199500 Sobic008G140400--Sobic003G199500 Sobic003G253400 Sobic003G253400 Sobic003G062400--Sobic003G253400 Sobic008G160500 Sobic008G160500 Sobic003G062400--Sobic008G160500 Sobic004G145600 Sobic004G145600 Sobic003G062400--Sobic004G145600 Sobic003G062400--Sobic003G038600 Sobic003G062400--Sobic001G005600 Sobic004G068500 Sobic004G068500 Sobic003G062400--Sobic004G068500 Sobic009G125000 Sobic009G125000 Sobic003G062400--Sobic009G125000 Sobic003G062400--Sobic002G267400 Sobic003G062400--Sobic002G357900 Sobic008G111700 Sobic008G111700 Sobic003G038600--Sobic008G111700 Sobic007G111100 Sobic007G111100 Sobic003G038600--Sobic007G111100 Sobic010G017000 Sobic010G017000 Sobic003G038600--Sobic010G017000 Sobic002G272600 Sobic002G272600 Sobic003G038600--Sobic002G272600 Sobic006G002500 Sobic006G002500 Sobic003G038600--Sobic006G002500 Sobic009G258400 Sobic009G258400 Sobic003G038600--Sobic009G258400 Sobic003G247900 Sobic003G247900 Sobic003G038600--Sobic003G247900 Sobic003G005200 Sobic003G005200 Sobic003G038600--Sobic003G005200 Sobic010G235200 Sobic010G235200 Sobic003G038600--Sobic010G235200 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200
Octagon: transcription factors


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