Gene annotation
Transcriptome id Sobic.004G207900.1
Synonym Sb04g025360
Functional annotation nucleotide-sugar transporter family protein, putative, expressed
UniProt A0A194YQW7
Pfam PF04142
Panther DB PTHR10231 PTHR10231:SF25
NCBI CDD KOG2234; Predicted UDP-galactose transporter
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008643carbohydrate transport GO:0005351carbohydrate:proton symporter activity GO:0000139Golgi membrane


Orthologs (automatic annotation)
TAIR AT2G43240 : Nucleotide-sugar transporter family protein
RAP-DB (Rice) LOC_Os02g39200.1 : nucleotide-sugar transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a031872 , Zm00025a021255
Brachypodium KQK00239 , PNT68995 , KQK11027 , KQK11026
Barley HORVU5Hr1G069200.1 , HORVU3Hr1G089360.13 , HORVU3Hr1G089360.12 , HORVU3Hr1G089360.11 , HORVU3Hr1G089360.10 , HORVU3Hr1G089360.17 , HORVU3Hr1G089360.16 , HORVU3Hr1G089360.15 , HORVU3Hr1G089360.14 , HORVU3Hr1G089360.19 , HORVU3Hr1G089360.18 , HORVU3Hr1G089360.3 , HORVU3Hr1G089360.2 , HORVU3Hr1G089360.1 , HORVU3Hr1G089360.7 , HORVU3Hr1G089360.6 , HORVU3Hr1G089360.5 , HORVU3Hr1G089360.4 , HORVU3Hr1G089360.9 , HORVU3Hr1G089360.8 , HORVU3Hr1G089360.22 , HORVU3Hr1G089360.20 , HORVU3Hr1G089360.21 , HORVU6Hr1G055030.13 , HORVU6Hr1G055030.12 , HORVU6Hr1G055030.11 , HORVU6Hr1G055030.10 , HORVU6Hr1G055030.16 , HORVU6Hr1G055030.15 , HORVU6Hr1G055030.14 , HORVU6Hr1G055030.3 , HORVU6Hr1G055030.2 , HORVU6Hr1G055030.1 , HORVU6Hr1G055030.7 , HORVU6Hr1G055030.6 , HORVU6Hr1G055030.5 , HORVU6Hr1G055030.4 , HORVU6Hr1G055030.9 , HORVU6Hr1G055030.8
Wheat TraesCS3B02G428500 , TraesCS3B02G428500 , TraesCS3D02G390500 , TraesCS3D02G390500 , TraesCS2A02G348300 , TraesCS2B02G366700 , TraesCS6A02G217200 , TraesCS6B02G245500 , TraesCS2D02G346700 , TraesCS3A02G396500 , TraesCS6D02G198300 , TraesCS6D02G198300
Populus PNT23351 , PNT23350 , PNT17235 , PNT23349


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
2 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
3 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
4 Sobic.001G023100 ACBP4, putative, expressed -
5 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
6 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
7 Sobic.002G141700 unc-50, putative, expressed -
8 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
9 Sobic.002G294100 DOMON domain containing protein, expressed -
10 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
11 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
14 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
15 Sobic.007G005500 ECT protein, putative, expressed -
16 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.001G193100 expressed protein -
18 Sobic.001G097500 expressed protein -
19 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
20 Sobic.005G022100 transporter-related, putative, expressed K15285: solute carrier family 35, member E3


Gene co-expression network
sample Sobic004G207900 Sobic004G207900 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G100200 Sobic004G100200 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G161700--Sobic001G023100 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic008G085700 Sobic008G085700 Sobic001G161700--Sobic008G085700 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic008G055900 Sobic008G055900 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic009G077600--Sobic004G207900 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic010G223300 Sobic010G223300 Sobic009G077600--Sobic010G223300 Sobic004G078700 Sobic004G078700 Sobic004G100200--Sobic004G078700 Sobic004G100200--Sobic007G005500 Sobic004G100200--Sobic006G260500 Sobic004G100200--Sobic003G209200 Sobic004G100200--Sobic009G077600 Sobic010G169900 Sobic010G169900 Sobic004G100200--Sobic010G169900 Sobic004G100200--Sobic003G346400 Sobic004G100200--Sobic004G207900 Sobic004G241900 Sobic004G241900 Sobic004G100200--Sobic004G241900 Sobic002G029300 Sobic002G029300 Sobic001G023100--Sobic002G029300 Sobic007G173700 Sobic007G173700 Sobic001G023100--Sobic007G173700 Sobic009G226400 Sobic009G226400 Sobic001G023100--Sobic009G226400 Sobic001G023100--Sobic008G055900 Sobic001G023100--Sobic001G161700 Sobic001G023100--Sobic008G072200 Sobic001G193100 Sobic001G193100 Sobic001G023100--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G023100--Sobic003G270600 Sobic001G023100--Sobic008G085700 Sobic003G346400--Sobic004G254800 Sobic006G021700 Sobic006G021700 Sobic003G346400--Sobic006G021700 Sobic004G060300 Sobic004G060300 Sobic003G346400--Sobic004G060300 Sobic003G394200 Sobic003G394200 Sobic003G346400--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic003G346400--Sobic006G203300 Sobic001G445500 Sobic001G445500 Sobic003G346400--Sobic001G445500 Sobic003G346400--Sobic003G209200 Sobic003G346400--Sobic001G161700 Sobic003G346400--Sobic001G012900 Sobic001G332300 Sobic001G332300 Sobic004G025300--Sobic001G332300 Sobic005G184200 Sobic005G184200 Sobic004G025300--Sobic005G184200 Sobic004G025300--Sobic004G207900 Sobic008G110500 Sobic008G110500 Sobic004G025300--Sobic008G110500 Sobic001G378200 Sobic001G378200 Sobic004G025300--Sobic001G378200 Sobic006G083100 Sobic006G083100 Sobic004G025300--Sobic006G083100 Sobic001G451901 Sobic001G451901 Sobic004G025300--Sobic001G451901 Sobic005G207400 Sobic005G207400 Sobic004G025300--Sobic005G207400 Sobic001G408100 Sobic001G408100 Sobic004G025300--Sobic001G408100 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic001G443200 Sobic001G443200 Sobic002G141700--Sobic001G443200 Sobic001G077900 Sobic001G077900 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic001G220900 Sobic001G220900 Sobic002G141700--Sobic001G220900 Sobic002G141700--Sobic007G173700 Sobic002G141700--Sobic002G029300 Sobic003G134800 Sobic003G134800 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic006G056200 Sobic006G056200 Sobic008G129600--Sobic006G056200 Sobic008G103300 Sobic008G103300 Sobic008G129600--Sobic008G103300 Sobic010G264000 Sobic010G264000 Sobic008G129600--Sobic010G264000 Sobic001G467100 Sobic001G467100 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic002G294100--Sobic007G005500 Sobic002G294100--Sobic004G100200 Sobic002G294100--Sobic004G207900 Sobic002G294100--Sobic004G241900 Sobic002G294100--Sobic009G077600 Sobic002G294100--Sobic001G449900 Sobic003G036500 Sobic003G036500 Sobic002G294100--Sobic003G036500 Sobic001G431000 Sobic001G431000 Sobic002G294100--Sobic001G431000 Sobic002G238400 Sobic002G238400 Sobic002G294100--Sobic002G238400
Octagon: transcription factors


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