Gene annotation
Transcriptome id Sobic.003G209200.1,Sobic.003G209200.2
Synonym ATBBETA, Sb03g027000
Functional annotation serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
UniProt C5XQ76 , C5XQ78
Pfam -
Panther DB PTHR11871 PTHR11871:SF9
NCBI CDD -
KEGG Orthology K04354; serine/threonine-protein phosphatase 2A regulatory subunit B
Gene Ontology GO:0000159; protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT1G17720 : Protein phosphatase 2A, regulatory subunit PR55
RAP-DB (Rice) LOC_Os01g41630.1 : serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
MaizeGDB (Corn) Zm00025a038453 , Zm00025a028619
Brachypodium KQK08585 , KQK08586
Barley HORVU3Hr1G052380.7 , HORVU3Hr1G052380.12 , HORVU3Hr1G052380.1 , HORVU3Hr1G052380.3 , HORVU3Hr1G052380.2 , HORVU3Hr1G052380.5 , HORVU3Hr1G052380.4 , HORVU3Hr1G052380.6 , HORVU3Hr1G052380.9 , HORVU3Hr1G052380.20 , HORVU3Hr1G052380.21 , HORVU3Hr1G052380.22 , HORVU3Hr1G052380.24 , HORVU3Hr1G052380.25 , HORVU3Hr1G052380.26 , HORVU3Hr1G052380.15 , HORVU3Hr1G052380.14 , HORVU3Hr1G052380.17 , HORVU3Hr1G052380.16 , HORVU3Hr1G052380.11 , HORVU3Hr1G052380.10 , HORVU3Hr1G052380.13 , HORVU3Hr1G052380.8 , HORVU3Hr1G052380.19 , HORVU3Hr1G052380.18
Wheat TraesCS3A02G214500 , TraesCS3A02G214500 , TraesCS3D02G217100 , TraesCS3D02G217100 , TraesCS3B02G245100 , TraesCS3B02G245100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G005500 ECT protein, putative, expressed -
2 Sobic.006G260500 expressed protein -
3 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
4 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
5 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
6 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
7 Sobic.004G261600 expressed protein -
8 Sobic.005G110499 - K14006: protein transport protein SEC23
9 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
10 Sobic.003G346400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
11 Sobic.003G023300 Alg9-like mannosyltransferase protein, putative, expressed K03846: alpha-1,2-mannosyltransferase
12 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.004G322400 WD40-like, putative, expressed -
15 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
16 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.005G020300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
18 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
19 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
20 Sobic.001G056800 GTP binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G209200 Sobic003G209200 Sobic007G005500 Sobic007G005500 Sobic003G209200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic003G209200--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic003G209200--Sobic006G077300 Sobic006G021700 Sobic006G021700 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic004G261600 Sobic004G261600 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300 Sobic003G114400 Sobic003G114400 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic008G124800 Sobic008G124800 Sobic006G021700--Sobic008G124800 Sobic006G021700--Sobic006G077300 Sobic002G340900 Sobic002G340900 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic006G021700--Sobic010G000800 Sobic006G021700--Sobic007G005500 Sobic006G021700--Sobic005G110499 Sobic008G088872 Sobic008G088872 Sobic005G062200--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic005G062200--Sobic001G263600 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic004G241900--Sobic007G005500 Sobic004G241900--Sobic006G260500 Sobic004G241900--Sobic003G209200 Sobic004G241900--Sobic005G062200 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic004G241900--Sobic001G263600 Sobic004G241900--Sobic004G261600 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic003G189600 Sobic003G189600 Sobic005G110499--Sobic003G189600 Sobic001G474400 Sobic001G474400 Sobic005G110499--Sobic001G474400 Sobic001G308400 Sobic001G308400 Sobic005G110499--Sobic001G308400 Sobic003G394200 Sobic003G394200 Sobic005G110499--Sobic003G394200 Sobic004G053500 Sobic004G053500 Sobic005G110499--Sobic004G053500 Sobic005G110499--Sobic002G401500 Sobic005G110499--Sobic006G021700 Sobic002G371700 Sobic002G371700 Sobic005G110499--Sobic002G371700 Sobic005G110499--Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic008G055900 Sobic008G055900 Sobic009G077600--Sobic008G055900 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic009G077600--Sobic010G223300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.