Gene annotation
Transcriptome id Sobic.006G260500.1
Synonym Sb06g032340
Functional annotation expressed protein
UniProt C5YA37
Pfam PF08737
Panther DB PTHR12507 PTHR12507:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G50120 : -
RAP-DB (Rice) LOC_Os06g41440.2 : expressed protein
MaizeGDB (Corn) Zm00025a009371
Brachypodium PNT75634 , KQK17654 , KQK17656 , KQK17655 , KQK04683 , KQK04682 , KQK04681 , KQK04684 , KQK17653
Barley HORVU0Hr1G022050.11 , HORVU0Hr1G022050.10 , HORVU0Hr1G022060.1 , HORVU0Hr1G022060.2 , HORVU0Hr1G022060.3 , HORVU0Hr1G022060.5 , HORVU0Hr1G022060.6 , HORVU0Hr1G022050.5 , HORVU0Hr1G022050.4 , HORVU0Hr1G022050.7 , HORVU0Hr1G022050.6 , HORVU0Hr1G022050.1 , HORVU0Hr1G022050.3 , HORVU0Hr1G022050.2 , HORVU0Hr1G022050.9 , HORVU0Hr1G022050.8
Wheat TraesCS7D02G395800 , TraesCS7D02G395800 , TraesCS7D02G395800 , TraesCS7D02G395800 , TraesCS7A02G402000 , TraesCS3D02G174700 , TraesCS7A02G402000 , TraesCS7B02G302100 , TraesCS7B02G302100 , TraesCS7B02G302100
Populus -


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cDNA sequences
Sobic.006G260500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
2 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
3 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
4 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
6 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.007G005500 ECT protein, putative, expressed -
8 Sobic.007G075500 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
9 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
10 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
11 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
12 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
13 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
14 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
15 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
16 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
17 Sobic.008G085700 exocyst complex component 5, putative, expressed -
18 Sobic.003G316200 transmembrane protein 49, putative, expressed -
19 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
20 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN


Gene co-expression network
sample Sobic006G260500 Sobic006G260500 Sobic003G114400 Sobic003G114400 Sobic006G260500--Sobic003G114400 Sobic006G077300 Sobic006G077300 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic003G209200 Sobic003G209200 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic005G062200 Sobic005G062200 Sobic006G260500--Sobic005G062200 Sobic007G005500 Sobic007G005500 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic003G114400--Sobic006G260500 Sobic003G114400--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic003G114400--Sobic008G088872 Sobic003G114400--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic003G114400--Sobic005G090300 Sobic006G184900 Sobic006G184900 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic003G114400--Sobic004G241900 Sobic006G077300--Sobic006G260500 Sobic006G077300--Sobic006G021700 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic006G077300--Sobic003G114400 Sobic006G077300--Sobic007G005500 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic004G241900--Sobic007G005500 Sobic004G241900--Sobic006G260500 Sobic004G241900--Sobic003G209200 Sobic004G241900--Sobic005G062200 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic001G263600 Sobic001G263600 Sobic004G241900--Sobic001G263600 Sobic004G261600 Sobic004G261600 Sobic004G241900--Sobic004G261600 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic003G209200--Sobic005G062200 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic008G055900 Sobic008G055900 Sobic010G223300--Sobic008G055900 Sobic001G449900 Sobic001G449900 Sobic010G223300--Sobic001G449900 Sobic002G020700 Sobic002G020700 Sobic010G223300--Sobic002G020700 Sobic003G338500 Sobic003G338500 Sobic010G223300--Sobic003G338500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G020400 Sobic010G020400 Sobic010G223300--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic010G223300--Sobic002G008800 Sobic006G180000 Sobic006G180000 Sobic010G223300--Sobic006G180000 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic005G062200--Sobic002G401500 Sobic005G062200--Sobic006G184900 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300 Sobic007G075500--Sobic006G260500 Sobic007G075500--Sobic010G223300 Sobic007G075500--Sobic002G008800 Sobic008G003700 Sobic008G003700 Sobic007G075500--Sobic008G003700 Sobic007G075500--Sobic004G241900 Sobic003G087000 Sobic003G087000 Sobic007G075500--Sobic003G087000 Sobic007G075500--Sobic003G338500 Sobic007G075500--Sobic004G261600 Sobic007G075500--Sobic002G020700 Sobic008G124800 Sobic008G124800 Sobic006G021700--Sobic008G124800 Sobic006G021700--Sobic006G077300 Sobic002G340900 Sobic002G340900 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic006G021700--Sobic010G000800 Sobic006G021700--Sobic007G005500 Sobic006G021700--Sobic005G110499
Octagon: transcription factors


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