Gene annotation
Transcriptome id Sobic.004G241900.1
Synonym Sb04g028270, DegP9
Functional annotation OsDegp3 - Putative Deg protease homologue, expressed
UniProt C5XYW5
Pfam PF13180 PF13365
Panther DB PTHR22939 PTHR22939:SF67
NCBI CDD KOG1320; Serine protease
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G40200 : DegP protease 9
RAP-DB (Rice) LOC_Os02g50880.1 : OsDegp3 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a033216 , Zm00025a031755 , Zm00025a022002 , Zm00025a039190
Brachypodium KQK18825 , KQK01963 , KQK01962 , KQK01964
Barley HORVU6Hr1G076200.3 , HORVU6Hr1G076200.2 , HORVU6Hr1G076200.1
Wheat TraesCS6D02G288200 , TraesCS6B02G337900 , TraesCS6A02G308900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G005500 ECT protein, putative, expressed -
2 Sobic.006G260500 expressed protein -
3 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
5 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
6 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
7 Sobic.006G277000 heat shock protein DnaJ, putative, expressed -
8 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
9 Sobic.004G261600 expressed protein -
10 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
11 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
12 Sobic.002G405400 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed K01001: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
13 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
14 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
15 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
16 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
17 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
18 Sobic.007G075500 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
19 Sobic.001G431000 Sel1 repeat domain containing protein, putative, expressed K14026: SEL1, SEL1 protein
20 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G


Gene co-expression network
sample Sobic004G241900 Sobic004G241900 Sobic007G005500 Sobic007G005500 Sobic004G241900--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic004G241900--Sobic006G260500 Sobic003G209200 Sobic003G209200 Sobic004G241900--Sobic003G209200 Sobic005G062200 Sobic005G062200 Sobic004G241900--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic001G263600 Sobic001G263600 Sobic004G241900--Sobic001G263600 Sobic004G261600 Sobic004G261600 Sobic004G241900--Sobic004G261600 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic006G021700 Sobic006G021700 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic006G077300 Sobic006G077300 Sobic007G005500--Sobic006G077300 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic003G209200--Sobic005G062200 Sobic003G209200--Sobic004G241900 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic008G088872 Sobic008G088872 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic002G401500 Sobic002G401500 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic003G114400--Sobic006G260500 Sobic003G114400--Sobic005G062200 Sobic003G114400--Sobic008G088872 Sobic003G114400--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic003G114400--Sobic005G090300 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic003G114400--Sobic004G241900 Sobic003G264100 Sobic003G264100 Sobic006G196300--Sobic003G264100 Sobic002G405400 Sobic002G405400 Sobic006G196300--Sobic002G405400 Sobic001G455800 Sobic001G455800 Sobic006G196300--Sobic001G455800 Sobic002G142900 Sobic002G142900 Sobic006G196300--Sobic002G142900 Sobic010G020400 Sobic010G020400 Sobic006G196300--Sobic010G020400 Sobic001G333100 Sobic001G333100 Sobic006G196300--Sobic001G333100 Sobic001G227400 Sobic001G227400 Sobic006G196300--Sobic001G227400 Sobic006G196300--Sobic004G241900 Sobic002G303600 Sobic002G303600 Sobic006G196300--Sobic002G303600 Sobic006G277000--Sobic004G241900 Sobic006G166200 Sobic006G166200 Sobic006G277000--Sobic006G166200 Sobic001G015400 Sobic001G015400 Sobic006G277000--Sobic001G015400 Sobic006G277000--Sobic006G196300 Sobic002G398700 Sobic002G398700 Sobic006G277000--Sobic002G398700 Sobic006G277000--Sobic007G005500 Sobic002G238400 Sobic002G238400 Sobic006G277000--Sobic002G238400 Sobic001G474400 Sobic001G474400 Sobic006G277000--Sobic001G474400 Sobic007G112600 Sobic007G112600 Sobic006G277000--Sobic007G112600 Sobic001G263600--Sobic008G088872 Sobic002G429300 Sobic002G429300 Sobic001G263600--Sobic002G429300 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic009G131300 Sobic009G131300 Sobic001G263600--Sobic009G131300 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic006G126100 Sobic006G126100 Sobic004G261600--Sobic006G126100 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800
Octagon: transcription factors


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