Gene annotation
Transcriptome id Sobic.002G405400.1
Synonym Sb02g041960, GPT
Functional annotation UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed
UniProt C5X4S4
Pfam PF00953
Panther DB PTHR10571 PTHR10571:SF0
NCBI CDD KOG2788; Glycosyltransferase
KEGG Orthology K01001; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
Gene Ontology GO:0016021; integral component of membrane GO:0008963phospho-N-acetylmuramoyl-pentapeptide-transferase activity


Orthologs (automatic annotation)
TAIR AT2G41490 : UDP-glcnac-adolichol phosphate glcnac-1-p-transferase
RAP-DB (Rice) LOC_Os07g46640.1 : UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a015362 , Zm00025a049043
Brachypodium KQK14823
Barley HORVU2Hr1G022350.8 , HORVU2Hr1G022350.1 , HORVU2Hr1G022350.2 , HORVU2Hr1G022350.3 , HORVU2Hr1G022350.4 , HORVU2Hr1G022350.5 , HORVU2Hr1G022350.6 , HORVU2Hr1G022350.7
Wheat TraesCS2B02G149100 , TraesCS2A02G127300 , TraesCS2D02G129700 , TraesCS2A02G127300
Populus -


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cDNA sequences
Sobic.002G405400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G196300 glycosyl transferase, group 1 domain containing protein, expressed K03843: alpha-1,3/alpha-1,6-mannosyltransferase
2 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
3 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
4 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
5 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
6 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
7 Sobic.008G085700 exocyst complex component 5, putative, expressed -
8 Sobic.006G260500 expressed protein -
9 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
10 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
11 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
12 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
13 Sobic.003G338500 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
14 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
15 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
16 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
17 Sobic.009G154500 sec23/Sec24 zinc finger family protein, expressed -
18 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
19 Sobic.007G167900 signal peptide peptidase domain containing protein, expressed K09598: signal peptide peptidase-like 3
20 Sobic.007G005500 ECT protein, putative, expressed -


Gene co-expression network
sample Sobic002G405400 Sobic002G405400 Sobic006G196300 Sobic006G196300 Sobic002G405400--Sobic006G196300 Sobic004G206700 Sobic004G206700 Sobic002G405400--Sobic004G206700 Sobic010G020400 Sobic010G020400 Sobic002G405400--Sobic010G020400 Sobic008G055900 Sobic008G055900 Sobic002G405400--Sobic008G055900 Sobic004G241900 Sobic004G241900 Sobic002G405400--Sobic004G241900 Sobic010G223300 Sobic010G223300 Sobic002G405400--Sobic010G223300 Sobic008G085700 Sobic008G085700 Sobic002G405400--Sobic008G085700 Sobic006G260500 Sobic006G260500 Sobic002G405400--Sobic006G260500 Sobic006G180000 Sobic006G180000 Sobic002G405400--Sobic006G180000 Sobic003G264100 Sobic003G264100 Sobic006G196300--Sobic003G264100 Sobic006G196300--Sobic002G405400 Sobic001G455800 Sobic001G455800 Sobic006G196300--Sobic001G455800 Sobic002G142900 Sobic002G142900 Sobic006G196300--Sobic002G142900 Sobic006G196300--Sobic010G020400 Sobic001G333100 Sobic001G333100 Sobic006G196300--Sobic001G333100 Sobic001G227400 Sobic001G227400 Sobic006G196300--Sobic001G227400 Sobic006G196300--Sobic004G241900 Sobic002G303600 Sobic002G303600 Sobic006G196300--Sobic002G303600 Sobic004G206700--Sobic002G405400 Sobic009G084000 Sobic009G084000 Sobic004G206700--Sobic009G084000 Sobic001G199100 Sobic001G199100 Sobic004G206700--Sobic001G199100 Sobic004G206700--Sobic010G223300 Sobic003G338500 Sobic003G338500 Sobic004G206700--Sobic003G338500 Sobic004G206700--Sobic006G180000 Sobic009G123600 Sobic009G123600 Sobic004G206700--Sobic009G123600 Sobic002G059300 Sobic002G059300 Sobic004G206700--Sobic002G059300 Sobic004G194900 Sobic004G194900 Sobic004G206700--Sobic004G194900 Sobic002G020700 Sobic002G020700 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic002G008800 Sobic002G008800 Sobic010G020400--Sobic002G008800 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic010G020400--Sobic001G333100 Sobic010G020400--Sobic010G223300 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic007G005500 Sobic007G005500 Sobic004G241900--Sobic007G005500 Sobic004G241900--Sobic006G260500 Sobic003G209200 Sobic003G209200 Sobic004G241900--Sobic003G209200 Sobic005G062200 Sobic005G062200 Sobic004G241900--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic004G241900--Sobic003G114400 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic001G263600 Sobic001G263600 Sobic004G241900--Sobic001G263600 Sobic004G261600 Sobic004G261600 Sobic004G241900--Sobic004G261600 Sobic010G223300--Sobic008G055900 Sobic001G449900 Sobic001G449900 Sobic010G223300--Sobic001G449900 Sobic010G223300--Sobic002G020700 Sobic010G223300--Sobic003G338500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G223300--Sobic010G020400 Sobic010G223300--Sobic002G008800 Sobic010G223300--Sobic006G180000 Sobic008G085700--Sobic002G020700 Sobic008G085700--Sobic001G449900 Sobic002G070600 Sobic002G070600 Sobic008G085700--Sobic002G070600 Sobic008G085700--Sobic010G020400 Sobic008G085700--Sobic008G055900 Sobic005G110499 Sobic005G110499 Sobic008G085700--Sobic005G110499 Sobic008G085700--Sobic001G049400 Sobic001G161700 Sobic001G161700 Sobic008G085700--Sobic001G161700 Sobic010G192600 Sobic010G192600 Sobic008G085700--Sobic010G192600 Sobic006G260500--Sobic003G114400 Sobic006G077300 Sobic006G077300 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic006G180000--Sobic002G303600 Sobic002G047700 Sobic002G047700 Sobic006G180000--Sobic002G047700 Sobic006G180000--Sobic003G264100 Sobic006G180000--Sobic010G223300 Sobic009G092400 Sobic009G092400 Sobic006G180000--Sobic009G092400 Sobic001G007000 Sobic001G007000 Sobic006G180000--Sobic001G007000 Sobic006G180000--Sobic010G020400 Sobic006G180000--Sobic004G092500 Sobic004G028100 Sobic004G028100 Sobic006G180000--Sobic004G028100
Octagon: transcription factors


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