Gene annotation
Transcriptome id Sobic.006G077300.1,Sobic.006G077300.2
Synonym SEC5A, Sb06g016440
Functional annotation expressed protein
UniProt C5YGD2
Pfam PF15469
Panther DB PTHR13043
NCBI CDD -
KEGG Orthology K17637; EXOC2, exocyst complex component 2
Gene Ontology GO:0006893; Golgi to plasma membrane transport GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT1G76850 : exocyst complex component sec5
RAP-DB (Rice) LOC_Os04g34450.1 : expressed protein
MaizeGDB (Corn) Zm00025a023214 , Zm00025a056916 , Zm00025a011440 , Zm00025a056036 , Zm00025a034067
Brachypodium KQJ82595
Barley HORVU2Hr1G074320.6 , HORVU2Hr1G074320.7 , HORVU2Hr1G074320.4 , HORVU2Hr1G074320.5 , HORVU2Hr1G074320.2 , HORVU2Hr1G074320.3 , HORVU2Hr1G074320.1
Wheat TraesCS2B02G316400 , TraesCS2A02G300100 , TraesCS2D02G298000 , TraesCS2D02G298000 , TraesCS2A02G300100 , TraesCS2A02G300100
Populus -


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cDNA sequences
Sobic.006G077300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G260500 expressed protein -
2 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
3 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
4 Sobic.001G056800 GTP binding protein, putative, expressed -
5 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
6 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
7 Sobic.007G005500 ECT protein, putative, expressed -
8 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
9 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
10 Sobic.005G177700 transmembrane protein 49, putative, expressed -
11 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
12 Sobic.004G322400 WD40-like, putative, expressed -
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.003G394200 vacuolar protein sorting-associated protein 53, putative, expressed -
15 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
16 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
17 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.004G261600 expressed protein -
19 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
20 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -


Gene co-expression network
sample Sobic006G077300 Sobic006G077300 Sobic006G260500 Sobic006G260500 Sobic006G077300--Sobic006G260500 Sobic006G021700 Sobic006G021700 Sobic006G077300--Sobic006G021700 Sobic003G209200 Sobic003G209200 Sobic006G077300--Sobic003G209200 Sobic001G056800 Sobic001G056800 Sobic006G077300--Sobic001G056800 Sobic002G401500 Sobic002G401500 Sobic006G077300--Sobic002G401500 Sobic003G114400 Sobic003G114400 Sobic006G077300--Sobic003G114400 Sobic007G005500 Sobic007G005500 Sobic006G077300--Sobic007G005500 Sobic005G062200 Sobic005G062200 Sobic006G077300--Sobic005G062200 Sobic002G042600 Sobic002G042600 Sobic006G077300--Sobic002G042600 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic010G223300 Sobic010G223300 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic008G124800 Sobic008G124800 Sobic006G021700--Sobic008G124800 Sobic006G021700--Sobic006G077300 Sobic002G340900 Sobic002G340900 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic010G000800 Sobic010G000800 Sobic006G021700--Sobic010G000800 Sobic006G021700--Sobic007G005500 Sobic005G110499 Sobic005G110499 Sobic006G021700--Sobic005G110499 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic003G209200--Sobic006G077300 Sobic003G209200--Sobic006G021700 Sobic003G209200--Sobic005G062200 Sobic003G209200--Sobic004G241900 Sobic004G261600 Sobic004G261600 Sobic003G209200--Sobic004G261600 Sobic003G209200--Sobic005G110499 Sobic009G077600 Sobic009G077600 Sobic003G209200--Sobic009G077600 Sobic001G056800--Sobic006G077300 Sobic005G090300 Sobic005G090300 Sobic001G056800--Sobic005G090300 Sobic004G236200 Sobic004G236200 Sobic001G056800--Sobic004G236200 Sobic001G056800--Sobic003G209200 Sobic001G056800--Sobic006G021700 Sobic001G056800--Sobic002G340900 Sobic003G394200 Sobic003G394200 Sobic001G056800--Sobic003G394200 Sobic006G203300 Sobic006G203300 Sobic001G056800--Sobic006G203300 Sobic002G156000 Sobic002G156000 Sobic001G056800--Sobic002G156000 Sobic004G322400 Sobic004G322400 Sobic002G401500--Sobic004G322400 Sobic009G131300 Sobic009G131300 Sobic002G401500--Sobic009G131300 Sobic002G401500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G401500--Sobic004G053500 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic001G065100 Sobic001G065100 Sobic002G401500--Sobic001G065100 Sobic008G088872 Sobic008G088872 Sobic002G401500--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic002G401500--Sobic001G263600 Sobic003G114400--Sobic006G260500 Sobic003G114400--Sobic005G062200 Sobic003G114400--Sobic008G088872 Sobic003G114400--Sobic006G077300 Sobic003G114400--Sobic005G090300 Sobic006G184900 Sobic006G184900 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G316200 Sobic003G316200 Sobic003G114400--Sobic003G316200 Sobic003G114400--Sobic004G241900 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic010G169900 Sobic010G169900 Sobic007G005500--Sobic010G169900 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic005G062200--Sobic002G401500 Sobic005G062200--Sobic006G184900 Sobic005G062200--Sobic002G042600 Sobic005G062200--Sobic003G209200 Sobic005G062200--Sobic003G114400 Sobic005G062200--Sobic001G065100 Sobic002G335600 Sobic002G335600 Sobic005G062200--Sobic002G335600 Sobic002G042600--Sobic001G065100 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G042600--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic002G042600--Sobic002G179400 Sobic002G042600--Sobic004G322400 Sobic002G042600--Sobic002G429300 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900
Octagon: transcription factors


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