Gene annotation
Transcriptome id Sobic.003G316200.2,Sobic.003G316200.1
Synonym Sb03g036350
Functional annotation transmembrane protein 49, putative, expressed
UniProt A0A1B6Q6G4 , A0A1B6Q6H1
Pfam PF09335
Panther DB PTHR10281 PTHR10281:SF44
NCBI CDD KOG1109; Vacuole membrane protein VMP1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14950 : SNARE associated Golgi protein family
RAP-DB (Rice) LOC_Os01g57066.1 : transmembrane protein 49, putative, expressed
MaizeGDB (Corn) Zm00025a027294 , Zm00025a029434
Brachypodium KQK10052 , KQK10051
Barley -
Wheat TraesCS3A02G318400 , TraesCS3D02G312800
Populus -


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cDNA sequences
Sobic.003G316200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
2 Sobic.005G177700 transmembrane protein 49, putative, expressed -
3 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
4 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
5 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
6 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
7 Sobic.002G079000 expressed protein -
8 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
9 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
10 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
11 Sobic.006G260500 expressed protein -
12 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
13 Sobic.007G172700 ECT5, putative, expressed -
14 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
15 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
17 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
18 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
19 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
20 Sobic.006G060000 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase


Gene co-expression network
sample Sobic003G316200 Sobic003G316200 Sobic001G253300 Sobic001G253300 Sobic003G316200--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G316200--Sobic005G177700 Sobic003G365100 Sobic003G365100 Sobic003G316200--Sobic003G365100 Sobic001G188400 Sobic001G188400 Sobic003G316200--Sobic001G188400 Sobic006G250800 Sobic006G250800 Sobic003G316200--Sobic006G250800 Sobic004G078700 Sobic004G078700 Sobic003G316200--Sobic004G078700 Sobic002G079000 Sobic002G079000 Sobic003G316200--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G316200--Sobic002G355800 Sobic003G114400 Sobic003G114400 Sobic003G316200--Sobic003G114400 Sobic001G253300--Sobic003G316200 Sobic001G253300--Sobic001G188400 Sobic007G172700 Sobic007G172700 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic001G253300--Sobic003G365100 Sobic001G253300--Sobic005G177700 Sobic001G253300--Sobic002G355800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic005G177700--Sobic003G316200 Sobic007G056100 Sobic007G056100 Sobic005G177700--Sobic007G056100 Sobic005G177700--Sobic002G355800 Sobic006G077300 Sobic006G077300 Sobic005G177700--Sobic006G077300 Sobic009G041700 Sobic009G041700 Sobic005G177700--Sobic009G041700 Sobic005G177700--Sobic001G253300 Sobic004G228800 Sobic004G228800 Sobic005G177700--Sobic004G228800 Sobic005G177700--Sobic003G365100 Sobic002G268800 Sobic002G268800 Sobic005G177700--Sobic002G268800 Sobic003G365100--Sobic003G316200 Sobic002G306100 Sobic002G306100 Sobic003G365100--Sobic002G306100 Sobic003G365100--Sobic001G253300 Sobic003G365100--Sobic005G177700 Sobic003G156400 Sobic003G156400 Sobic003G365100--Sobic003G156400 Sobic007G182000 Sobic007G182000 Sobic003G365100--Sobic007G182000 Sobic003G365100--Sobic006G250800 Sobic003G365100--Sobic001G188400 Sobic005G090300 Sobic005G090300 Sobic003G365100--Sobic005G090300 Sobic006G115100 Sobic006G115100 Sobic001G188400--Sobic006G115100 Sobic001G188400--Sobic001G253300 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic001G188400--Sobic002G079000 Sobic001G188400--Sobic002G355800 Sobic002G084800 Sobic002G084800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic006G250800--Sobic002G079000 Sobic006G250800--Sobic001G188400 Sobic009G217400 Sobic009G217400 Sobic006G250800--Sobic009G217400 Sobic006G250800--Sobic003G316200 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic007G087000 Sobic007G087000 Sobic006G250800--Sobic007G087000 Sobic006G250800--Sobic001G253300 Sobic006G250800--Sobic002G306100 Sobic001G389200 Sobic001G389200 Sobic004G078700--Sobic001G389200 Sobic001G465400 Sobic001G465400 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic010G223400 Sobic010G223400 Sobic004G078700--Sobic010G223400 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic007G118500 Sobic007G118500 Sobic004G078700--Sobic007G118500 Sobic001G378200 Sobic001G378200 Sobic004G078700--Sobic001G378200 Sobic004G078700--Sobic003G316200 Sobic002G079000--Sobic007G087000 Sobic010G169900 Sobic010G169900 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic006G128100 Sobic006G128100 Sobic002G079000--Sobic006G128100 Sobic002G079000--Sobic006G250800 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic001G490900 Sobic001G490900 Sobic002G079000--Sobic001G490900 Sobic002G355800--Sobic010G169900 Sobic002G355800--Sobic007G172700 Sobic002G355800--Sobic006G128100 Sobic002G355800--Sobic010G213500 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic002G355800--Sobic009G162100 Sobic002G355800--Sobic005G177700 Sobic006G260500 Sobic006G260500 Sobic003G114400--Sobic006G260500 Sobic005G062200 Sobic005G062200 Sobic003G114400--Sobic005G062200 Sobic008G088872 Sobic008G088872 Sobic003G114400--Sobic008G088872 Sobic003G114400--Sobic006G077300 Sobic003G114400--Sobic005G090300 Sobic006G184900 Sobic006G184900 Sobic003G114400--Sobic006G184900 Sobic002G252400 Sobic002G252400 Sobic003G114400--Sobic002G252400 Sobic003G114400--Sobic003G316200 Sobic004G241900 Sobic004G241900 Sobic003G114400--Sobic004G241900
Octagon: transcription factors


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