Gene annotation
Transcriptome id Sobic.002G141700.1
Synonym Sb02g013040
Functional annotation unc-50, putative, expressed
UniProt C5X6R1
Pfam PF05216
Panther DB PTHR12841
NCBI CDD KOG3012; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G15240 : UNC-50 family protein
RAP-DB (Rice) LOC_Os09g02170.1 : unc-50, putative, expressed
MaizeGDB (Corn) Zm00025a046000
Brachypodium KQJ86883
Barley HORVU5Hr1G049960.3 , HORVU5Hr1G049960.2 , HORVU5Hr1G049960.1 , HORVU5Hr1G049960.7 , HORVU5Hr1G049960.6 , HORVU5Hr1G049960.5
Wheat TraesCS5B02G157400 , TraesCS5B02G157400 , TraesCS5B02G157400 , TraesCS5A02G159700 , TraesCS5D02G164700 , TraesCS5D02G164700 , TraesCS5D02G164700
Populus -


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cDNA sequences
Sobic.002G141700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G261800 expressed protein -
2 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
4 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
5 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
6 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
8 Sobic.003G134800 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
9 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.001G023100 ACBP4, putative, expressed -
11 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
12 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
13 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
14 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
15 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
16 Sobic.008G072200 coatomer subunit delta, putative, expressed -
17 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
18 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
19 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3


Gene co-expression network
sample Sobic002G141700 Sobic002G141700 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic001G443200 Sobic001G443200 Sobic002G141700--Sobic001G443200 Sobic001G077900 Sobic001G077900 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic001G220900 Sobic001G220900 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic003G134800 Sobic003G134800 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic003G261800--Sobic002G141700 Sobic003G261800--Sobic001G443200 Sobic004G347600 Sobic004G347600 Sobic003G261800--Sobic004G347600 Sobic010G040900 Sobic010G040900 Sobic003G261800--Sobic010G040900 Sobic009G191400 Sobic009G191400 Sobic003G261800--Sobic009G191400 Sobic001G112400 Sobic001G112400 Sobic003G261800--Sobic001G112400 Sobic001G387800 Sobic001G387800 Sobic003G261800--Sobic001G387800 Sobic004G000100 Sobic004G000100 Sobic003G261800--Sobic004G000100 Sobic004G344800 Sobic004G344800 Sobic003G261800--Sobic004G344800 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic004G039400 Sobic004G039400 Sobic001G443200--Sobic004G039400 Sobic001G443200--Sobic001G112400 Sobic001G443200--Sobic004G344800 Sobic001G443200--Sobic002G141700 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic002G262200 Sobic002G262200 Sobic001G443200--Sobic002G262200 Sobic001G077900--Sobic001G443200 Sobic001G077900--Sobic002G141700 Sobic003G196200 Sobic003G196200 Sobic001G077900--Sobic003G196200 Sobic001G161700 Sobic001G161700 Sobic001G077900--Sobic001G161700 Sobic003G009300 Sobic003G009300 Sobic001G077900--Sobic003G009300 Sobic001G490500 Sobic001G490500 Sobic001G077900--Sobic001G490500 Sobic006G029000 Sobic006G029000 Sobic001G077900--Sobic006G029000 Sobic001G077900--Sobic004G000100 Sobic006G232000 Sobic006G232000 Sobic001G077900--Sobic006G232000 Sobic001G035400 Sobic001G035400 Sobic002G087000--Sobic001G035400 Sobic002G087000--Sobic002G141700 Sobic002G087000--Sobic001G443200 Sobic009G234400 Sobic009G234400 Sobic002G087000--Sobic009G234400 Sobic001G196100 Sobic001G196100 Sobic002G087000--Sobic001G196100 Sobic007G176200 Sobic007G176200 Sobic002G087000--Sobic007G176200 Sobic003G224300 Sobic003G224300 Sobic002G087000--Sobic003G224300 Sobic006G211800 Sobic006G211800 Sobic002G087000--Sobic006G211800 Sobic005G105500 Sobic005G105500 Sobic002G087000--Sobic005G105500 Sobic001G220900--Sobic001G490500 Sobic001G220900--Sobic002G141700 Sobic001G281900 Sobic001G281900 Sobic001G220900--Sobic001G281900 Sobic008G151500 Sobic008G151500 Sobic001G220900--Sobic008G151500 Sobic001G145500 Sobic001G145500 Sobic001G220900--Sobic001G145500 Sobic001G220900--Sobic001G443200 Sobic001G220900--Sobic003G134800 Sobic001G220900--Sobic003G009300 Sobic001G220900--Sobic001G077900 Sobic007G173700--Sobic002G029300 Sobic007G173700--Sobic004G000100 Sobic001G023100 Sobic001G023100 Sobic007G173700--Sobic001G023100 Sobic001G193100 Sobic001G193100 Sobic007G173700--Sobic001G193100 Sobic007G173700--Sobic001G161700 Sobic001G061200 Sobic001G061200 Sobic007G173700--Sobic001G061200 Sobic007G173700--Sobic002G141700 Sobic001G049400 Sobic001G049400 Sobic007G173700--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic007G173700--Sobic003G394200 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic002G029300--Sobic001G161700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200 Sobic002G070600 Sobic002G070600 Sobic003G134800--Sobic002G070600 Sobic003G134800--Sobic008G072200 Sobic003G134800--Sobic002G141700 Sobic010G178600 Sobic010G178600 Sobic003G134800--Sobic010G178600 Sobic001G117800 Sobic001G117800 Sobic003G134800--Sobic001G117800 Sobic002G423500 Sobic002G423500 Sobic003G134800--Sobic002G423500 Sobic003G134800--Sobic001G220900 Sobic001G151600 Sobic001G151600 Sobic003G134800--Sobic001G151600 Sobic003G143700 Sobic003G143700 Sobic003G134800--Sobic003G143700 Sobic007G217400 Sobic007G217400 Sobic001G542900--Sobic007G217400 Sobic002G423800 Sobic002G423800 Sobic001G542900--Sobic002G423800 Sobic004G335000 Sobic004G335000 Sobic001G542900--Sobic004G335000 Sobic008G110500 Sobic008G110500 Sobic001G542900--Sobic008G110500 Sobic003G043400 Sobic003G043400 Sobic001G542900--Sobic003G043400 Sobic001G444300 Sobic001G444300 Sobic001G542900--Sobic001G444300 Sobic001G542900--Sobic002G141700 Sobic009G164700 Sobic009G164700 Sobic001G542900--Sobic009G164700 Sobic001G542900--Sobic007G176200
Octagon: transcription factors


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