Gene annotation
Transcriptome id Sobic.006G114400.1
Synonym ATGRX4, Sb06g019580, GRX4
Functional annotation OsGrx_S15.2 - glutaredoxin subgroup II, expressed
UniProt C5YAA6
Pfam PF00462
Panther DB PTHR10293 PTHR10293:SF16
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K07390; grxD, monothiol glutaredoxin
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT3G15660 : glutaredoxin 4
RAP-DB (Rice) LOC_Os01g34620.2 : OsGrx_S15.1 - glutaredoxin subgroup II, expressed
MaizeGDB (Corn) Zm00025a038054 , Zm00025a056264 , Zm00025a035733
Brachypodium KQK13095 , KQK02955
Barley HORVU3Hr1G023970.2 , HORVU3Hr1G023970.3 , HORVU3Hr1G023970.1 , HORVU3Hr1G023970.6 , HORVU3Hr1G023970.7 , HORVU3Hr1G023970.4 , HORVU3Hr1G023970.5
Wheat TraesCS3B02G147100 , TraesCS3B02G147100 , TraesCS3A02G127900 , TraesCS3D02G128900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
2 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
3 Sobic.003G087000 expressed protein -
4 Sobic.002G113800 spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
5 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
6 Sobic.002G141700 unc-50, putative, expressed -
7 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
8 Sobic.004G194900 expressed protein -
9 Sobic.009G225000 transmembrane protein 93, putative, expressed -
10 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
11 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
12 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
13 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
14 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
15 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
16 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
17 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
18 Sobic.003G261800 expressed protein -
19 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
20 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9


Gene co-expression network
sample Sobic006G114400 Sobic006G114400 Sobic009G139800 Sobic009G139800 Sobic006G114400--Sobic009G139800 Sobic003G009300 Sobic003G009300 Sobic006G114400--Sobic003G009300 Sobic003G087000 Sobic003G087000 Sobic006G114400--Sobic003G087000 Sobic002G113800 Sobic002G113800 Sobic006G114400--Sobic002G113800 Sobic004G335000 Sobic004G335000 Sobic006G114400--Sobic004G335000 Sobic002G141700 Sobic002G141700 Sobic006G114400--Sobic002G141700 Sobic007G142500 Sobic007G142500 Sobic006G114400--Sobic007G142500 Sobic004G194900 Sobic004G194900 Sobic006G114400--Sobic004G194900 Sobic009G225000 Sobic009G225000 Sobic006G114400--Sobic009G225000 Sobic009G139800--Sobic006G114400 Sobic001G109300 Sobic001G109300 Sobic009G139800--Sobic001G109300 Sobic008G113600 Sobic008G113600 Sobic009G139800--Sobic008G113600 Sobic003G428200 Sobic003G428200 Sobic009G139800--Sobic003G428200 Sobic009G139800--Sobic002G141700 Sobic001G058100 Sobic001G058100 Sobic009G139800--Sobic001G058100 Sobic009G139800--Sobic003G087000 Sobic003G280300 Sobic003G280300 Sobic009G139800--Sobic003G280300 Sobic001G010700 Sobic001G010700 Sobic009G139800--Sobic001G010700 Sobic003G009300--Sobic006G114400 Sobic001G077900 Sobic001G077900 Sobic003G009300--Sobic001G077900 Sobic006G232000 Sobic006G232000 Sobic003G009300--Sobic006G232000 Sobic001G220900 Sobic001G220900 Sobic003G009300--Sobic001G220900 Sobic001G443200 Sobic001G443200 Sobic003G009300--Sobic001G443200 Sobic007G176200 Sobic007G176200 Sobic003G009300--Sobic007G176200 Sobic003G009300--Sobic001G109300 Sobic003G009300--Sobic002G141700 Sobic001G444300 Sobic001G444300 Sobic003G009300--Sobic001G444300 Sobic010G064600 Sobic010G064600 Sobic003G087000--Sobic010G064600 Sobic010G261600 Sobic010G261600 Sobic003G087000--Sobic010G261600 Sobic003G087000--Sobic006G114400 Sobic008G093000 Sobic008G093000 Sobic003G087000--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic003G087000--Sobic007G075500 Sobic003G087000--Sobic009G225000 Sobic004G228800 Sobic004G228800 Sobic003G087000--Sobic004G228800 Sobic003G312200 Sobic003G312200 Sobic003G087000--Sobic003G312200 Sobic003G087000--Sobic009G139800 Sobic010G073100 Sobic010G073100 Sobic002G113800--Sobic010G073100 Sobic003G259700 Sobic003G259700 Sobic002G113800--Sobic003G259700 Sobic001G033500 Sobic001G033500 Sobic002G113800--Sobic001G033500 Sobic001G010400 Sobic001G010400 Sobic002G113800--Sobic001G010400 Sobic010G046300 Sobic010G046300 Sobic002G113800--Sobic010G046300 Sobic010G151000 Sobic010G151000 Sobic002G113800--Sobic010G151000 Sobic002G113800--Sobic006G114400 Sobic002G113800--Sobic007G142500 Sobic006G217700 Sobic006G217700 Sobic002G113800--Sobic006G217700 Sobic002G428200 Sobic002G428200 Sobic004G335000--Sobic002G428200 Sobic004G335000--Sobic007G176200 Sobic004G335000--Sobic001G010700 Sobic002G257400 Sobic002G257400 Sobic004G335000--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic004G335000--Sobic006G252200 Sobic001G236300 Sobic001G236300 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic004G335000--Sobic001G058100 Sobic007G045600 Sobic007G045600 Sobic004G335000--Sobic007G045600 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic002G141700--Sobic001G443200 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic003G134800 Sobic003G134800 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic007G142500--Sobic007G045600 Sobic001G458700 Sobic001G458700 Sobic007G142500--Sobic001G458700 Sobic007G142500--Sobic001G461900 Sobic003G261400 Sobic003G261400 Sobic007G142500--Sobic003G261400 Sobic003G323600 Sobic003G323600 Sobic007G142500--Sobic003G323600 Sobic007G142500--Sobic007G176200 Sobic009G088100 Sobic009G088100 Sobic007G142500--Sobic009G088100 Sobic007G142500--Sobic004G335000 Sobic002G281300 Sobic002G281300 Sobic007G142500--Sobic002G281300 Sobic010G205300 Sobic010G205300 Sobic004G194900--Sobic010G205300 Sobic004G194900--Sobic002G281300 Sobic006G044600 Sobic006G044600 Sobic004G194900--Sobic006G044600 Sobic003G349300 Sobic003G349300 Sobic004G194900--Sobic003G349300 Sobic004G194900--Sobic009G225000 Sobic004G310500 Sobic004G310500 Sobic004G194900--Sobic004G310500 Sobic004G194900--Sobic001G458700 Sobic001G085100 Sobic001G085100 Sobic004G194900--Sobic001G085100 Sobic005G111900 Sobic005G111900 Sobic004G194900--Sobic005G111900 Sobic006G281800 Sobic006G281800 Sobic009G225000--Sobic006G281800 Sobic001G283200 Sobic001G283200 Sobic009G225000--Sobic001G283200 Sobic009G225000--Sobic004G194900 Sobic004G181900 Sobic004G181900 Sobic009G225000--Sobic004G181900 Sobic009G225000--Sobic001G461900 Sobic009G225000--Sobic007G142500 Sobic001G460600 Sobic001G460600 Sobic009G225000--Sobic001G460600 Sobic004G206700 Sobic004G206700 Sobic009G225000--Sobic004G206700 Sobic009G225000--Sobic003G349300
Octagon: transcription factors


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