Gene annotation
Transcriptome id Sobic.009G139800.1,Sobic.009G139800.2
Synonym AT-GDI1, Sb09g020530, ATGDI1, GDI1
Functional annotation rab GDP dissociation inhibitor alpha, putative, expressed
UniProt A0A1B6P8G3 , A0A1B6P8G4
Pfam PF00996
Panther DB PTHR11787 PTHR11787:SF11
NCBI CDD -
KEGG Orthology K17255; Rab GDP dissociation inhibitor
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44100 : guanosine nucleotide diphosphate dissociation inhibitor 1,RAB GDP dissociation inhibitor 2
RAP-DB (Rice) LOC_Os05g23860.1 : rab GDP dissociation inhibitor alpha, putative, expressed
MaizeGDB (Corn) Zm00025a013641 , Zm00025a037400 , Zm00025a039131 , Zm00025a043715 , Zm00025a015631 , Zm00025a037399
Brachypodium PNT76764 , KQK22323 , KQK06220 , KQK06219 , KQK20184
Barley HORVU1Hr1G064490.8 , HORVU1Hr1G064490.9 , HORVU1Hr1G064490.2 , HORVU1Hr1G064490.3 , HORVU1Hr1G064490.1 , HORVU1Hr1G064490.6 , HORVU1Hr1G064490.7 , HORVU1Hr1G064490.4 , HORVU1Hr1G064490.5 , HORVU4Hr1G059240.20 , HORVU2Hr1G104740.1 , HORVU2Hr1G104740.2 , HORVU1Hr1G064490.10 , HORVU1Hr1G064490.11 , HORVU1Hr1G064490.12 , HORVU1Hr1G064490.13 , HORVU1Hr1G064490.14 , HORVU1Hr1G064490.15 , HORVU4Hr1G059240.2 , HORVU4Hr1G059240.1 , HORVU4Hr1G059240.6 , HORVU4Hr1G059240.7 , HORVU4Hr1G059240.4 , HORVU4Hr1G059240.9 , HORVU5Hr1G009840.10 , HORVU1Hr1G064480.1 , HORVU1Hr1G064480.3 , HORVU1Hr1G064480.2 , HORVU7Hr1G010790.2 , HORVU4Hr1G059230.2 , HORVU7Hr1G075170.1 , HORVU7Hr1G075170.2 , HORVU4Hr1G059240.11 , HORVU4Hr1G059240.12 , HORVU4Hr1G059240.13 , HORVU4Hr1G059240.14 , HORVU4Hr1G059240.15 , HORVU4Hr1G059240.17 , HORVU4Hr1G059240.18 , HORVU4Hr1G059240.19 , HORVU5Hr1G009840.8 , HORVU5Hr1G009840.9 , HORVU4Hr1G059230.1 , HORVU5Hr1G009840.1 , HORVU5Hr1G009840.2 , HORVU5Hr1G009840.3 , HORVU5Hr1G009840.4 , HORVU5Hr1G009840.5 , HORVU5Hr1G009840.6 , HORVU5Hr1G009840.7
Wheat TraesCS1B02G271800 , TraesCS1B02G271800 , TraesCS5A02G041100 , TraesCS1B02G271700 , TraesCS1B02G271700 , TraesCS1D02G260900 , TraesCS1D02G260900 , TraesCS1A02G261000 , TraesCS1A02G261000 , TraesCS1A02G260900 , TraesCS1A02G260900 , TraesCS5B02G042400 , TraesCS5D02G048100 , TraesCS1D02G261000
Populus -


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cDNA sequences
Sobic.009G139800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
2 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
3 Sobic.008G113600 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
4 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
5 Sobic.002G141700 unc-50, putative, expressed -
6 Sobic.001G058100 thioredoxin, putative, expressed -
7 Sobic.003G087000 expressed protein -
8 Sobic.003G280300 STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
9 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
10 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
11 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
12 Sobic.001G220900 adaptin ear-binding coat-associated protein 2, putative, expressed -
13 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
14 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
15 Sobic.006G281800 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18
16 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
17 Sobic.003G009300 methyltransferase domain containing protein, putative, expressed K06127: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
18 Sobic.003G047100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K12261: 2-hydroxyacyl-CoA lyase 1
19 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
20 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -


Gene co-expression network
sample Sobic009G139800 Sobic009G139800 Sobic006G114400 Sobic006G114400 Sobic009G139800--Sobic006G114400 Sobic001G109300 Sobic001G109300 Sobic009G139800--Sobic001G109300 Sobic008G113600 Sobic008G113600 Sobic009G139800--Sobic008G113600 Sobic003G428200 Sobic003G428200 Sobic009G139800--Sobic003G428200 Sobic002G141700 Sobic002G141700 Sobic009G139800--Sobic002G141700 Sobic001G058100 Sobic001G058100 Sobic009G139800--Sobic001G058100 Sobic003G087000 Sobic003G087000 Sobic009G139800--Sobic003G087000 Sobic003G280300 Sobic003G280300 Sobic009G139800--Sobic003G280300 Sobic001G010700 Sobic001G010700 Sobic009G139800--Sobic001G010700 Sobic006G114400--Sobic009G139800 Sobic003G009300 Sobic003G009300 Sobic006G114400--Sobic003G009300 Sobic006G114400--Sobic003G087000 Sobic002G113800 Sobic002G113800 Sobic006G114400--Sobic002G113800 Sobic004G335000 Sobic004G335000 Sobic006G114400--Sobic004G335000 Sobic006G114400--Sobic002G141700 Sobic007G142500 Sobic007G142500 Sobic006G114400--Sobic007G142500 Sobic004G194900 Sobic004G194900 Sobic006G114400--Sobic004G194900 Sobic009G225000 Sobic009G225000 Sobic006G114400--Sobic009G225000 Sobic007G176200 Sobic007G176200 Sobic001G109300--Sobic007G176200 Sobic001G109300--Sobic009G139800 Sobic006G252200 Sobic006G252200 Sobic001G109300--Sobic006G252200 Sobic001G109300--Sobic001G010700 Sobic001G109300--Sobic003G428200 Sobic003G330500 Sobic003G330500 Sobic001G109300--Sobic003G330500 Sobic001G281900 Sobic001G281900 Sobic001G109300--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic001G109300--Sobic001G458700 Sobic009G067000 Sobic009G067000 Sobic001G109300--Sobic009G067000 Sobic008G113600--Sobic009G139800 Sobic003G169900 Sobic003G169900 Sobic008G113600--Sobic003G169900 Sobic002G375800 Sobic002G375800 Sobic008G113600--Sobic002G375800 Sobic001G220900 Sobic001G220900 Sobic008G113600--Sobic001G220900 Sobic001G338400 Sobic001G338400 Sobic008G113600--Sobic001G338400 Sobic007G075500 Sobic007G075500 Sobic008G113600--Sobic007G075500 Sobic003G348800 Sobic003G348800 Sobic008G113600--Sobic003G348800 Sobic001G077900 Sobic001G077900 Sobic008G113600--Sobic001G077900 Sobic008G113600--Sobic001G109300 Sobic009G117200 Sobic009G117200 Sobic003G428200--Sobic009G117200 Sobic004G204800 Sobic004G204800 Sobic003G428200--Sobic004G204800 Sobic003G428200--Sobic001G010700 Sobic003G428200--Sobic009G139800 Sobic007G076300 Sobic007G076300 Sobic003G428200--Sobic007G076300 Sobic003G428200--Sobic001G109300 Sobic009G093200 Sobic009G093200 Sobic003G428200--Sobic009G093200 Sobic002G257400 Sobic002G257400 Sobic003G428200--Sobic002G257400 Sobic003G428200--Sobic007G176200 Sobic003G261800 Sobic003G261800 Sobic002G141700--Sobic003G261800 Sobic001G443200 Sobic001G443200 Sobic002G141700--Sobic001G443200 Sobic002G141700--Sobic001G077900 Sobic002G087000 Sobic002G087000 Sobic002G141700--Sobic002G087000 Sobic002G141700--Sobic001G220900 Sobic007G173700 Sobic007G173700 Sobic002G141700--Sobic007G173700 Sobic002G029300 Sobic002G029300 Sobic002G141700--Sobic002G029300 Sobic003G134800 Sobic003G134800 Sobic002G141700--Sobic003G134800 Sobic001G542900 Sobic001G542900 Sobic002G141700--Sobic001G542900 Sobic001G236300 Sobic001G236300 Sobic001G058100--Sobic001G236300 Sobic001G058100--Sobic004G335000 Sobic001G058100--Sobic002G257400 Sobic001G058100--Sobic006G252200 Sobic010G044200 Sobic010G044200 Sobic001G058100--Sobic010G044200 Sobic001G289400 Sobic001G289400 Sobic001G058100--Sobic001G289400 Sobic003G104700 Sobic003G104700 Sobic001G058100--Sobic003G104700 Sobic006G220900 Sobic006G220900 Sobic001G058100--Sobic006G220900 Sobic002G083266 Sobic002G083266 Sobic001G058100--Sobic002G083266 Sobic010G064600 Sobic010G064600 Sobic003G087000--Sobic010G064600 Sobic010G261600 Sobic010G261600 Sobic003G087000--Sobic010G261600 Sobic003G087000--Sobic006G114400 Sobic008G093000 Sobic008G093000 Sobic003G087000--Sobic008G093000 Sobic003G087000--Sobic007G075500 Sobic003G087000--Sobic009G225000 Sobic004G228800 Sobic004G228800 Sobic003G087000--Sobic004G228800 Sobic003G312200 Sobic003G312200 Sobic003G087000--Sobic003G312200 Sobic003G087000--Sobic009G139800 Sobic003G280300--Sobic009G139800 Sobic003G186700 Sobic003G186700 Sobic003G280300--Sobic003G186700 Sobic001G103900 Sobic001G103900 Sobic003G280300--Sobic001G103900 Sobic010G002400 Sobic010G002400 Sobic003G280300--Sobic010G002400 Sobic004G173600 Sobic004G173600 Sobic003G280300--Sobic004G173600 Sobic010G080200 Sobic010G080200 Sobic003G280300--Sobic010G080200 Sobic003G280300--Sobic006G114400 Sobic003G280300--Sobic001G010700 Sobic001G265600 Sobic001G265600 Sobic003G280300--Sobic001G265600 Sobic001G010700--Sobic007G176200 Sobic001G010700--Sobic006G252200 Sobic001G010700--Sobic001G458700 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800
Octagon: transcription factors


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