Gene annotation
Transcriptome id Sobic.001G058100.1
Synonym Sb01g005280
Functional annotation thioredoxin, putative, expressed
UniProt C5WX81
Pfam PF06201
Panther DB PTHR12175 PTHR12175:SF2
NCBI CDD KOG1730; Thioredoxin-like protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04780 : Protein of unknown function (DUF1000)
RAP-DB (Rice) LOC_Os03g58130.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a016579 , Zm00025a008553 , Zm00025a006820 , Zm00025a012432
Brachypodium KQK12717
Barley HORVU5Hr1G105750.3 , HORVU5Hr1G105750.2 , HORVU5Hr1G105750.1
Wheat TraesCS5A02G437600 , TraesCS5D02G444800 , TraesCS5B02G440400
Populus -


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cDNA sequences
Sobic.001G058100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G236300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
2 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
3 Sobic.002G257400 peptidase, T1 family, putative, expressed -
4 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
5 Sobic.010G044200 GLTP domain containing protein, putative, expressed -
6 Sobic.001G289400 expressed protein -
7 Sobic.003G104700 Rer1 protein, putative, expressed -
8 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
9 Sobic.002G083266 - K00326: cytochrome-b5 reductase
10 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
11 Sobic.004G224900 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
12 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
14 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
15 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
16 Sobic.004G276100 expressed protein -
17 Sobic.007G076300 26S proteasome non-ATPase regulatory subunit 8, putative, expressed K03031: PSMD8, 26S proteasome regulatory subunit N12
18 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
19 Sobic.007G176200 26S proteasome non-ATPase regulatory subunit 3, putative, expressed K03033: PSMD3, 26S proteasome regulatory subunit N3
20 Sobic.007G142500 EF hand family protein, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit


Gene co-expression network
sample Sobic001G058100 Sobic001G058100 Sobic001G236300 Sobic001G236300 Sobic001G058100--Sobic001G236300 Sobic004G335000 Sobic004G335000 Sobic001G058100--Sobic004G335000 Sobic002G257400 Sobic002G257400 Sobic001G058100--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic001G058100--Sobic006G252200 Sobic010G044200 Sobic010G044200 Sobic001G058100--Sobic010G044200 Sobic001G289400 Sobic001G289400 Sobic001G058100--Sobic001G289400 Sobic003G104700 Sobic003G104700 Sobic001G058100--Sobic003G104700 Sobic006G220900 Sobic006G220900 Sobic001G058100--Sobic006G220900 Sobic002G083266 Sobic002G083266 Sobic001G058100--Sobic002G083266 Sobic003G367451 Sobic003G367451 Sobic001G236300--Sobic003G367451 Sobic004G224900 Sobic004G224900 Sobic001G236300--Sobic004G224900 Sobic007G114200 Sobic007G114200 Sobic001G236300--Sobic007G114200 Sobic004G272800 Sobic004G272800 Sobic001G236300--Sobic004G272800 Sobic001G236300--Sobic001G058100 Sobic001G132100 Sobic001G132100 Sobic001G236300--Sobic001G132100 Sobic001G236300--Sobic006G252200 Sobic001G236300--Sobic004G335000 Sobic007G045600 Sobic007G045600 Sobic001G236300--Sobic007G045600 Sobic002G428200 Sobic002G428200 Sobic004G335000--Sobic002G428200 Sobic007G176200 Sobic007G176200 Sobic004G335000--Sobic007G176200 Sobic001G010700 Sobic001G010700 Sobic004G335000--Sobic001G010700 Sobic004G335000--Sobic002G257400 Sobic004G335000--Sobic006G252200 Sobic004G335000--Sobic001G236300 Sobic001G461900 Sobic001G461900 Sobic004G335000--Sobic001G461900 Sobic004G335000--Sobic001G058100 Sobic004G335000--Sobic007G045600 Sobic007G076300 Sobic007G076300 Sobic002G257400--Sobic007G076300 Sobic002G257400--Sobic004G224900 Sobic002G257400--Sobic004G335000 Sobic002G257400--Sobic002G428200 Sobic007G152400 Sobic007G152400 Sobic002G257400--Sobic007G152400 Sobic004G204800 Sobic004G204800 Sobic002G257400--Sobic004G204800 Sobic007G186800 Sobic007G186800 Sobic002G257400--Sobic007G186800 Sobic004G138800 Sobic004G138800 Sobic002G257400--Sobic004G138800 Sobic002G257400--Sobic001G058100 Sobic006G252200--Sobic007G176200 Sobic001G458700 Sobic001G458700 Sobic006G252200--Sobic001G458700 Sobic006G252200--Sobic004G224900 Sobic006G252200--Sobic001G010700 Sobic003G330500 Sobic003G330500 Sobic006G252200--Sobic003G330500 Sobic006G252200--Sobic002G428200 Sobic006G252200--Sobic004G138800 Sobic001G283200 Sobic001G283200 Sobic006G252200--Sobic001G283200 Sobic001G096100 Sobic001G096100 Sobic006G252200--Sobic001G096100 Sobic010G044200--Sobic004G224900 Sobic010G044200--Sobic001G058100 Sobic010G044200--Sobic007G076300 Sobic001G481700 Sobic001G481700 Sobic010G044200--Sobic001G481700 Sobic010G044200--Sobic006G252200 Sobic010G044200--Sobic003G330500 Sobic010G044200--Sobic007G176200 Sobic010G044200--Sobic002G257400 Sobic010G044200--Sobic004G138800 Sobic001G289400--Sobic001G058100 Sobic001G289400--Sobic006G220900 Sobic010G168200 Sobic010G168200 Sobic001G289400--Sobic010G168200 Sobic001G233532 Sobic001G233532 Sobic001G289400--Sobic001G233532 Sobic001G289400--Sobic001G010700 Sobic001G289400--Sobic004G204800 Sobic009G077400 Sobic009G077400 Sobic001G289400--Sobic009G077400 Sobic007G096700 Sobic007G096700 Sobic001G289400--Sobic007G096700 Sobic003G043400 Sobic003G043400 Sobic001G289400--Sobic003G043400 Sobic003G104700--Sobic002G428200 Sobic003G104700--Sobic006G252200 Sobic003G104700--Sobic007G076300 Sobic002G078400 Sobic002G078400 Sobic003G104700--Sobic002G078400 Sobic003G104700--Sobic003G367451 Sobic007G091000 Sobic007G091000 Sobic003G104700--Sobic007G091000 Sobic003G104700--Sobic001G236300 Sobic003G104700--Sobic004G224900 Sobic003G104700--Sobic004G335000 Sobic006G220900--Sobic001G058100 Sobic006G220900--Sobic001G289400 Sobic001G026900 Sobic001G026900 Sobic006G220900--Sobic001G026900 Sobic004G276100 Sobic004G276100 Sobic006G220900--Sobic004G276100 Sobic006G220900--Sobic004G335000 Sobic008G179500 Sobic008G179500 Sobic006G220900--Sobic008G179500 Sobic006G220900--Sobic002G083266 Sobic004G301400 Sobic004G301400 Sobic006G220900--Sobic004G301400 Sobic006G220900--Sobic007G096700 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic002G083266--Sobic004G272800
Octagon: transcription factors


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