Gene annotation
Transcriptome id Sobic.001G289400.6,Sobic.001G289400.5,Sobic.001G289400.8,Sobic.001G289400.9,Sobic.001G289400.2,Sobic.001G289400.3,Sobic.001G289400.1,Sobic.001G289400.4,Sobic.001G289400.10,Sobic.001G289400.7
Synonym Sb01g028360
Functional annotation expressed protein
UniProt A0A1B6QLQ9 , A0A1B6QLR8 , A0A1B6QLQ8 , A0A1B6QLQ5 , A0A1Z5S832 , A0A1Z5S846
Pfam PF01871
Panther DB PTHR13016
NCBI CDD KOG3274; Uncharacterized conserved protein, AMMECR1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38710 : AMMECR1 family
RAP-DB (Rice) LOC_Os10g42250.2,LOC_Os10g42250.1 : expressed protein
MaizeGDB (Corn) Zm00025a051834
Brachypodium KQJ97908
Barley HORVU1Hr1G050040.12 , HORVU1Hr1G050040.9 , HORVU1Hr1G050040.2 , HORVU1Hr1G050040.3 , HORVU1Hr1G050040.1 , HORVU1Hr1G050040.6 , HORVU1Hr1G050040.4
Wheat TraesCS1D02G195100 , TraesCS1A02G191400 , TraesCS1B02G206300
Populus -


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cDNA sequences
Sobic.001G289400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G058100 thioredoxin, putative, expressed -
2 Sobic.006G220900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
3 Sobic.010G168200 HAD superfamily phosphatase, putative, expressed -
4 Sobic.001G233532 - K10576: UBE2H, ubiquitin-conjugating enzyme E2 H
5 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
6 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
7 Sobic.009G077400 mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11
8 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
9 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
10 Sobic.009G122100 tetratricopeptide repeat containing protein, putative, expressed K17969: FIS1, TTC11, mitochondrial fission 1 protein
11 Sobic.002G261900 arabinogalactan protein, putative, expressed -
12 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
13 Sobic.002G387300 expressed protein K17435: large subunit ribosomal protein L54
14 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
15 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
16 Sobic.002G257400 peptidase, T1 family, putative, expressed -
17 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
18 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
19 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
20 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta


Gene co-expression network
sample Sobic001G289400 Sobic001G289400 Sobic001G058100 Sobic001G058100 Sobic001G289400--Sobic001G058100 Sobic006G220900 Sobic006G220900 Sobic001G289400--Sobic006G220900 Sobic010G168200 Sobic010G168200 Sobic001G289400--Sobic010G168200 Sobic001G233532 Sobic001G233532 Sobic001G289400--Sobic001G233532 Sobic001G010700 Sobic001G010700 Sobic001G289400--Sobic001G010700 Sobic004G204800 Sobic004G204800 Sobic001G289400--Sobic004G204800 Sobic009G077400 Sobic009G077400 Sobic001G289400--Sobic009G077400 Sobic007G096700 Sobic007G096700 Sobic001G289400--Sobic007G096700 Sobic003G043400 Sobic003G043400 Sobic001G289400--Sobic003G043400 Sobic001G236300 Sobic001G236300 Sobic001G058100--Sobic001G236300 Sobic004G335000 Sobic004G335000 Sobic001G058100--Sobic004G335000 Sobic002G257400 Sobic002G257400 Sobic001G058100--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic001G058100--Sobic006G252200 Sobic010G044200 Sobic010G044200 Sobic001G058100--Sobic010G044200 Sobic001G058100--Sobic001G289400 Sobic003G104700 Sobic003G104700 Sobic001G058100--Sobic003G104700 Sobic001G058100--Sobic006G220900 Sobic002G083266 Sobic002G083266 Sobic001G058100--Sobic002G083266 Sobic006G220900--Sobic001G058100 Sobic006G220900--Sobic001G289400 Sobic001G026900 Sobic001G026900 Sobic006G220900--Sobic001G026900 Sobic004G276100 Sobic004G276100 Sobic006G220900--Sobic004G276100 Sobic006G220900--Sobic004G335000 Sobic008G179500 Sobic008G179500 Sobic006G220900--Sobic008G179500 Sobic006G220900--Sobic002G083266 Sobic004G301400 Sobic004G301400 Sobic006G220900--Sobic004G301400 Sobic006G220900--Sobic007G096700 Sobic010G168200--Sobic001G289400 Sobic001G106400 Sobic001G106400 Sobic010G168200--Sobic001G106400 Sobic001G458200 Sobic001G458200 Sobic010G168200--Sobic001G458200 Sobic006G066600 Sobic006G066600 Sobic010G168200--Sobic006G066600 Sobic010G168200--Sobic001G233532 Sobic009G256200 Sobic009G256200 Sobic010G168200--Sobic009G256200 Sobic002G062500 Sobic002G062500 Sobic010G168200--Sobic002G062500 Sobic008G134900 Sobic008G134900 Sobic010G168200--Sobic008G134900 Sobic002G359900 Sobic002G359900 Sobic010G168200--Sobic002G359900 Sobic001G408900 Sobic001G408900 Sobic001G233532--Sobic001G408900 Sobic001G233532--Sobic001G058100 Sobic001G233532--Sobic007G096700 Sobic001G233532--Sobic004G276100 Sobic001G233532--Sobic001G289400 Sobic002G159500 Sobic002G159500 Sobic001G233532--Sobic002G159500 Sobic007G078100 Sobic007G078100 Sobic001G233532--Sobic007G078100 Sobic003G398300 Sobic003G398300 Sobic001G233532--Sobic003G398300 Sobic001G233532--Sobic008G179500 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic003G330500 Sobic003G330500 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic004G204800--Sobic002G257400 Sobic007G152400 Sobic007G152400 Sobic004G204800--Sobic007G152400 Sobic004G204800--Sobic004G335000 Sobic004G204800--Sobic003G043400 Sobic010G266300 Sobic010G266300 Sobic004G204800--Sobic010G266300 Sobic004G204800--Sobic001G058100 Sobic004G204800--Sobic002G428200 Sobic003G428200 Sobic003G428200 Sobic004G204800--Sobic003G428200 Sobic004G204800--Sobic001G010700 Sobic003G152900 Sobic003G152900 Sobic009G077400--Sobic003G152900 Sobic002G090700 Sobic002G090700 Sobic009G077400--Sobic002G090700 Sobic004G310300 Sobic004G310300 Sobic009G077400--Sobic004G310300 Sobic006G222400 Sobic006G222400 Sobic009G077400--Sobic006G222400 Sobic009G077400--Sobic010G266300 Sobic004G066800 Sobic004G066800 Sobic009G077400--Sobic004G066800 Sobic009G077400--Sobic001G010700 Sobic010G154700 Sobic010G154700 Sobic009G077400--Sobic010G154700 Sobic009G077400--Sobic001G058100 Sobic009G198500 Sobic009G198500 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic009G122100 Sobic009G122100 Sobic007G096700--Sobic009G122100 Sobic001G501200 Sobic001G501200 Sobic007G096700--Sobic001G501200 Sobic001G005900 Sobic001G005900 Sobic007G096700--Sobic001G005900 Sobic002G400000 Sobic002G400000 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic001G175800 Sobic001G175800 Sobic007G096700--Sobic001G175800 Sobic004G300900 Sobic004G300900 Sobic007G096700--Sobic004G300900 Sobic003G043400--Sobic002G423800 Sobic003G043400--Sobic001G010700 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic003G043400--Sobic004G335000 Sobic003G043400--Sobic007G152400 Sobic003G043400--Sobic006G222400
Octagon: transcription factors


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