Gene annotation
Transcriptome id Sobic.009G122100.1
Synonym Sb09g018990, FIS1A, BIGYIN
Functional annotation tetratricopeptide repeat containing protein, putative, expressed
UniProt C5YXD8
Pfam PF14852 PF14853
Panther DB PTHR13247 PTHR13247:SF3
NCBI CDD KOG3364; Membrane protein involved in organellar division
KEGG Orthology K17969; FIS1, TTC11, mitochondrial fission 1 protein
Gene Ontology GO:0000266; mitochondrial fission


Orthologs (automatic annotation)
TAIR AT3G57090 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os05g31770.1 : tetratricopeptide repeat containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037083
Brachypodium KQK06515
Barley HORVU1Hr1G057170.22 , HORVU1Hr1G057170.23 , HORVU1Hr1G057170.26 , HORVU1Hr1G057170.25
Wheat TraesCS1B02G252000 , TraesCS1D02G240000 , TraesCS1A02G239800
Populus -


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cDNA sequences
Sobic.009G122100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G096700 POEI30 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.002G257400 peptidase, T1 family, putative, expressed -
3 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
4 Sobic.008G111400 membrane protein, putative, expressed -
5 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
6 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
7 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
8 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
9 Sobic.001G058100 thioredoxin, putative, expressed -
10 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
11 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
12 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
13 Sobic.003G323600 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
14 Sobic.001G143300 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
15 Sobic.007G068000 postsynaptic protein CRIPT, putative, expressed -
16 Sobic.002G261900 arabinogalactan protein, putative, expressed -
17 Sobic.010G154700 - -
18 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
19 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
20 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -


Gene co-expression network
sample Sobic009G122100 Sobic009G122100 Sobic007G096700 Sobic007G096700 Sobic009G122100--Sobic007G096700 Sobic002G257400 Sobic002G257400 Sobic009G122100--Sobic002G257400 Sobic001G461900 Sobic001G461900 Sobic009G122100--Sobic001G461900 Sobic008G111400 Sobic008G111400 Sobic009G122100--Sobic008G111400 Sobic010G266300 Sobic010G266300 Sobic009G122100--Sobic010G266300 Sobic001G224400 Sobic001G224400 Sobic009G122100--Sobic001G224400 Sobic002G222900 Sobic002G222900 Sobic009G122100--Sobic002G222900 Sobic007G152400 Sobic007G152400 Sobic009G122100--Sobic007G152400 Sobic001G058100 Sobic001G058100 Sobic009G122100--Sobic001G058100 Sobic009G198500 Sobic009G198500 Sobic007G096700--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic007G096700--Sobic004G327300 Sobic007G096700--Sobic009G122100 Sobic001G501200 Sobic001G501200 Sobic007G096700--Sobic001G501200 Sobic001G005900 Sobic001G005900 Sobic007G096700--Sobic001G005900 Sobic002G400000 Sobic002G400000 Sobic007G096700--Sobic002G400000 Sobic004G130900 Sobic004G130900 Sobic007G096700--Sobic004G130900 Sobic001G175800 Sobic001G175800 Sobic007G096700--Sobic001G175800 Sobic004G300900 Sobic004G300900 Sobic007G096700--Sobic004G300900 Sobic007G076300 Sobic007G076300 Sobic002G257400--Sobic007G076300 Sobic004G224900 Sobic004G224900 Sobic002G257400--Sobic004G224900 Sobic004G335000 Sobic004G335000 Sobic002G257400--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic002G257400--Sobic002G428200 Sobic002G257400--Sobic007G152400 Sobic004G204800 Sobic004G204800 Sobic002G257400--Sobic004G204800 Sobic007G186800 Sobic007G186800 Sobic002G257400--Sobic007G186800 Sobic004G138800 Sobic004G138800 Sobic002G257400--Sobic004G138800 Sobic002G257400--Sobic001G058100 Sobic009G135600 Sobic009G135600 Sobic001G461900--Sobic009G135600 Sobic007G045600 Sobic007G045600 Sobic001G461900--Sobic007G045600 Sobic009G146100 Sobic009G146100 Sobic001G461900--Sobic009G146100 Sobic001G461900--Sobic004G327300 Sobic007G142500 Sobic007G142500 Sobic001G461900--Sobic007G142500 Sobic007G168600 Sobic007G168600 Sobic001G461900--Sobic007G168600 Sobic004G086600 Sobic004G086600 Sobic001G461900--Sobic004G086600 Sobic001G461900--Sobic004G335000 Sobic001G461900--Sobic007G096700 Sobic001G128400 Sobic001G128400 Sobic008G111400--Sobic001G128400 Sobic010G154700 Sobic010G154700 Sobic008G111400--Sobic010G154700 Sobic008G111400--Sobic009G122100 Sobic001G286300 Sobic001G286300 Sobic008G111400--Sobic001G286300 Sobic003G350300 Sobic003G350300 Sobic008G111400--Sobic003G350300 Sobic002G116200 Sobic002G116200 Sobic008G111400--Sobic002G116200 Sobic008G189300 Sobic008G189300 Sobic008G111400--Sobic008G189300 Sobic008G111400--Sobic007G096700 Sobic001G132100 Sobic001G132100 Sobic008G111400--Sobic001G132100 Sobic008G134900 Sobic008G134900 Sobic010G266300--Sobic008G134900 Sobic009G070200 Sobic009G070200 Sobic010G266300--Sobic009G070200 Sobic001G066700 Sobic001G066700 Sobic010G266300--Sobic001G066700 Sobic003G233500 Sobic003G233500 Sobic010G266300--Sobic003G233500 Sobic010G008800 Sobic010G008800 Sobic010G266300--Sobic010G008800 Sobic010G266300--Sobic007G152400 Sobic005G111100 Sobic005G111100 Sobic010G266300--Sobic005G111100 Sobic010G266300--Sobic001G224400 Sobic010G266300--Sobic004G204800 Sobic003G368500 Sobic003G368500 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic002G153500 Sobic002G153500 Sobic001G224400--Sobic002G153500 Sobic001G224400--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic001G224400--Sobic010G213400 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G224400--Sobic001G132100 Sobic001G224400--Sobic002G222900 Sobic002G222900--Sobic003G155400 Sobic002G222900--Sobic001G224400 Sobic007G134000 Sobic007G134000 Sobic002G222900--Sobic007G134000 Sobic002G222900--Sobic010G154700 Sobic007G068000 Sobic007G068000 Sobic002G222900--Sobic007G068000 Sobic010G225300 Sobic010G225300 Sobic002G222900--Sobic010G225300 Sobic001G459200 Sobic001G459200 Sobic002G222900--Sobic001G459200 Sobic002G222900--Sobic001G128400 Sobic007G051000 Sobic007G051000 Sobic002G222900--Sobic007G051000 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic007G152400--Sobic002G428200 Sobic007G152400--Sobic002G257400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic008G137600 Sobic008G137600 Sobic007G152400--Sobic008G137600 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic001G236300 Sobic001G236300 Sobic001G058100--Sobic001G236300 Sobic001G058100--Sobic004G335000 Sobic001G058100--Sobic002G257400 Sobic006G252200 Sobic006G252200 Sobic001G058100--Sobic006G252200 Sobic010G044200 Sobic010G044200 Sobic001G058100--Sobic010G044200 Sobic001G289400 Sobic001G289400 Sobic001G058100--Sobic001G289400 Sobic003G104700 Sobic003G104700 Sobic001G058100--Sobic003G104700 Sobic006G220900 Sobic006G220900 Sobic001G058100--Sobic006G220900 Sobic002G083266 Sobic002G083266 Sobic001G058100--Sobic002G083266
Octagon: transcription factors


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