Gene annotation
Transcriptome id Sobic.010G168200.1
Synonym Sb10g022110
Functional annotation HAD superfamily phosphatase, putative, expressed
UniProt C5Z4N3
Pfam PF03767
Panther DB PTHR31284 PTHR31284:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003993; acid phosphatase activity


Orthologs (automatic annotation)
TAIR AT4G25150 : HAD superfamily, subfamily IIIB acid phosphatase
RAP-DB (Rice) LOC_Os06g36400.1 : HAD superfamily phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a042312 , Zm00025a050091
Brachypodium KQK17988 , KQK17989 , KQK17985 , KQK17986 , KQK17987 , KQK19928 , KQK17990
Barley HORVU7Hr1G088340.4 , HORVU7Hr1G088340.2 , HORVU7Hr1G088340.3 , HORVU7Hr1G088340.1 , HORVU7Hr1G018600.3 , HORVU7Hr1G018600.1
Wheat TraesCS7D02G365400 , TraesCS7D02G365400 , TraesCS7D02G365400 , TraesCS7B02G270500 , TraesCS7B02G270500 , TraesCS7A02G357300 , TraesCS7D02G365400 , TraesCS7A02G357300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G168200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G289400 expressed protein -
2 Sobic.001G106400 serine esterase family protein, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
3 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
4 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
5 Sobic.001G233532 - K10576: UBE2H, ubiquitin-conjugating enzyme E2 H
6 Sobic.009G256200 expressed protein -
7 Sobic.002G062500 aldehyde dehydrogenase, putative, expressed K00140: mmsA, iolA, malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase
8 Sobic.008G134900 translocon-associated protein beta domain containing protein, expressed K13250: translocon-associated protein subunit beta
9 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
10 Sobic.010G253100 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
11 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
12 Sobic.004G349800 expressed protein -
13 Sobic.004G088700 expressed protein -
14 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
15 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
17 Sobic.009G055600 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.006G244500 nuclease PA3, putative, expressed -
19 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
20 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1


Gene co-expression network
sample Sobic010G168200 Sobic010G168200 Sobic001G289400 Sobic001G289400 Sobic010G168200--Sobic001G289400 Sobic001G106400 Sobic001G106400 Sobic010G168200--Sobic001G106400 Sobic001G458200 Sobic001G458200 Sobic010G168200--Sobic001G458200 Sobic006G066600 Sobic006G066600 Sobic010G168200--Sobic006G066600 Sobic001G233532 Sobic001G233532 Sobic010G168200--Sobic001G233532 Sobic009G256200 Sobic009G256200 Sobic010G168200--Sobic009G256200 Sobic002G062500 Sobic002G062500 Sobic010G168200--Sobic002G062500 Sobic008G134900 Sobic008G134900 Sobic010G168200--Sobic008G134900 Sobic002G359900 Sobic002G359900 Sobic010G168200--Sobic002G359900 Sobic001G058100 Sobic001G058100 Sobic001G289400--Sobic001G058100 Sobic006G220900 Sobic006G220900 Sobic001G289400--Sobic006G220900 Sobic001G289400--Sobic010G168200 Sobic001G289400--Sobic001G233532 Sobic001G010700 Sobic001G010700 Sobic001G289400--Sobic001G010700 Sobic004G204800 Sobic004G204800 Sobic001G289400--Sobic004G204800 Sobic009G077400 Sobic009G077400 Sobic001G289400--Sobic009G077400 Sobic007G096700 Sobic007G096700 Sobic001G289400--Sobic007G096700 Sobic003G043400 Sobic003G043400 Sobic001G289400--Sobic003G043400 Sobic004G067900 Sobic004G067900 Sobic001G106400--Sobic004G067900 Sobic002G308400 Sobic002G308400 Sobic001G106400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic001G106400--Sobic006G096300 Sobic001G106400--Sobic006G066600 Sobic002G393600 Sobic002G393600 Sobic001G106400--Sobic002G393600 Sobic001G106400--Sobic010G168200 Sobic009G232800 Sobic009G232800 Sobic001G106400--Sobic009G232800 Sobic004G102900 Sobic004G102900 Sobic001G106400--Sobic004G102900 Sobic009G070200 Sobic009G070200 Sobic001G106400--Sobic009G070200 Sobic003G192000 Sobic003G192000 Sobic001G458200--Sobic003G192000 Sobic003G128300 Sobic003G128300 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic001G458200--Sobic002G359900 Sobic002G093900 Sobic002G093900 Sobic001G458200--Sobic002G093900 Sobic001G458200--Sobic008G134900 Sobic003G148900 Sobic003G148900 Sobic001G458200--Sobic003G148900 Sobic002G306600 Sobic002G306600 Sobic001G458200--Sobic002G306600 Sobic002G044000 Sobic002G044000 Sobic001G458200--Sobic002G044000 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic006G066600--Sobic004G067900 Sobic006G066600--Sobic004G102900 Sobic006G244500 Sobic006G244500 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic004G155300 Sobic004G155300 Sobic006G066600--Sobic004G155300 Sobic006G066600--Sobic002G308400 Sobic001G408900 Sobic001G408900 Sobic001G233532--Sobic001G408900 Sobic001G233532--Sobic001G058100 Sobic001G233532--Sobic007G096700 Sobic004G276100 Sobic004G276100 Sobic001G233532--Sobic004G276100 Sobic001G233532--Sobic001G289400 Sobic002G159500 Sobic002G159500 Sobic001G233532--Sobic002G159500 Sobic007G078100 Sobic007G078100 Sobic001G233532--Sobic007G078100 Sobic003G398300 Sobic003G398300 Sobic001G233532--Sobic003G398300 Sobic008G179500 Sobic008G179500 Sobic001G233532--Sobic008G179500 Sobic010G221400 Sobic010G221400 Sobic009G256200--Sobic010G221400 Sobic009G171700 Sobic009G171700 Sobic009G256200--Sobic009G171700 Sobic010G193800 Sobic010G193800 Sobic009G256200--Sobic010G193800 Sobic010G101200 Sobic010G101200 Sobic009G256200--Sobic010G101200 Sobic003G316850 Sobic003G316850 Sobic009G256200--Sobic003G316850 Sobic002G256300 Sobic002G256300 Sobic009G256200--Sobic002G256300 Sobic009G246950 Sobic009G246950 Sobic009G256200--Sobic009G246950 Sobic004G203100 Sobic004G203100 Sobic009G256200--Sobic004G203100 Sobic002G352700 Sobic002G352700 Sobic009G256200--Sobic002G352700 Sobic002G252900 Sobic002G252900 Sobic002G062500--Sobic002G252900 Sobic006G261100 Sobic006G261100 Sobic002G062500--Sobic006G261100 Sobic002G062500--Sobic002G359900 Sobic002G385300 Sobic002G385300 Sobic002G062500--Sobic002G385300 Sobic009G055600 Sobic009G055600 Sobic002G062500--Sobic009G055600 Sobic005G030100 Sobic005G030100 Sobic002G062500--Sobic005G030100 Sobic002G062500--Sobic010G168200 Sobic001G196700 Sobic001G196700 Sobic002G062500--Sobic001G196700 Sobic002G390400 Sobic002G390400 Sobic002G062500--Sobic002G390400 Sobic010G266300 Sobic010G266300 Sobic008G134900--Sobic010G266300 Sobic008G134900--Sobic009G070200 Sobic001G066700 Sobic001G066700 Sobic008G134900--Sobic001G066700 Sobic007G152400 Sobic007G152400 Sobic008G134900--Sobic007G152400 Sobic008G134900--Sobic001G458200 Sobic008G134900--Sobic004G204800 Sobic009G122100 Sobic009G122100 Sobic008G134900--Sobic009G122100 Sobic008G134900--Sobic009G077400 Sobic003G382900 Sobic003G382900 Sobic008G134900--Sobic003G382900 Sobic010G253100 Sobic010G253100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic003G031200 Sobic003G031200 Sobic002G359900--Sobic003G031200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.