Gene annotation
Transcriptome id Sobic.010G088300.1
Synonym Sb10g007650
Functional annotation serine/threonine-protein phosphatase 2A activator 2, putative, expressed
UniProt C5Z6X6
Pfam PF03095
Panther DB PTHR10012 PTHR10012:SF0
NCBI CDD KOG2867; Phosphotyrosyl phosphatase activator
KEGG Orthology K17605; PPP2R4, serine/threonine-protein phosphatase 2A activator
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08960 : phosphotyrosyl phosphatase activator (PTPA) family protein
RAP-DB (Rice) LOC_Os06g11640.1 : serine/threonine-protein phosphatase 2A activator 2, putative, expressed
MaizeGDB (Corn) Zm00025a049505
Brachypodium KQK18941 , PNT76196
Barley HORVU7Hr1G036690.4 , HORVU7Hr1G036690.3 , HORVU7Hr1G036690.2
Wheat TraesCS7A02G178100 , TraesCS7B02G083800 , TraesCS7D02G179900
Populus -


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cDNA sequences
Sobic.010G088300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
2 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
3 Sobic.001G199300 GIL1, putative, expressed -
4 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
5 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
6 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
7 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
8 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
9 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
10 Sobic.008G111700 expressed protein -
11 Sobic.006G276200 F-box domain containing protein, expressed -
12 Sobic.006G143500 expressed protein -
13 Sobic.001G408100 Yip1 domain containing protein, expressed -
14 Sobic.009G070200 Der1-like family domain containing protein, expressed K13989: Derlin-2/3
15 Sobic.005G206700 WD domain, G-beta repeat domain containing protein, expressed K12602: WDR61, REC14, WD repeat-containing protein 61
16 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
17 Sobic.008G058700 metal cation transporter, putative, expressed -
18 Sobic.003G039200 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
19 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
20 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic010G088300 Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic010G088300--Sobic003G031200 Sobic003G043400 Sobic003G043400 Sobic010G088300--Sobic003G043400 Sobic001G199300 Sobic001G199300 Sobic010G088300--Sobic001G199300 Sobic001G434400 Sobic001G434400 Sobic010G088300--Sobic001G434400 Sobic002G423800 Sobic002G423800 Sobic010G088300--Sobic002G423800 Sobic004G137900 Sobic004G137900 Sobic010G088300--Sobic004G137900 Sobic004G204800 Sobic004G204800 Sobic010G088300--Sobic004G204800 Sobic002G044000 Sobic002G044000 Sobic010G088300--Sobic002G044000 Sobic003G126800 Sobic003G126800 Sobic010G088300--Sobic003G126800 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic002G359900 Sobic002G359900 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic003G031200--Sobic002G044000 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic003G043400--Sobic002G423800 Sobic001G010700 Sobic001G010700 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic004G335000 Sobic004G335000 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic001G199300--Sobic010G088300 Sobic001G199300--Sobic003G043400 Sobic005G187500 Sobic005G187500 Sobic001G199300--Sobic005G187500 Sobic001G199300--Sobic003G031200 Sobic001G544100 Sobic001G544100 Sobic001G199300--Sobic001G544100 Sobic003G307900 Sobic003G307900 Sobic001G199300--Sobic003G307900 Sobic003G190800 Sobic003G190800 Sobic001G199300--Sobic003G190800 Sobic001G199300--Sobic001G434400 Sobic001G199300--Sobic004G242100 Sobic006G276200 Sobic006G276200 Sobic001G434400--Sobic006G276200 Sobic001G434400--Sobic010G088300 Sobic004G012800 Sobic004G012800 Sobic001G434400--Sobic004G012800 Sobic006G231500 Sobic006G231500 Sobic001G434400--Sobic006G231500 Sobic001G434400--Sobic004G242100 Sobic001G434400--Sobic004G137900 Sobic006G109700 Sobic006G109700 Sobic001G434400--Sobic006G109700 Sobic001G130400 Sobic001G130400 Sobic001G434400--Sobic001G130400 Sobic005G110526 Sobic005G110526 Sobic001G434400--Sobic005G110526 Sobic002G423800--Sobic003G043400 Sobic006G211800 Sobic006G211800 Sobic002G423800--Sobic006G211800 Sobic002G423800--Sobic001G010700 Sobic001G444300 Sobic001G444300 Sobic002G423800--Sobic001G444300 Sobic002G423800--Sobic002G428200 Sobic001G542900 Sobic001G542900 Sobic002G423800--Sobic001G542900 Sobic006G252200 Sobic006G252200 Sobic002G423800--Sobic006G252200 Sobic008G145100 Sobic008G145100 Sobic002G423800--Sobic008G145100 Sobic007G176200 Sobic007G176200 Sobic002G423800--Sobic007G176200 Sobic004G137900--Sobic004G012800 Sobic006G231700 Sobic006G231700 Sobic004G137900--Sobic006G231700 Sobic003G358300 Sobic003G358300 Sobic004G137900--Sobic003G358300 Sobic006G013900 Sobic006G013900 Sobic004G137900--Sobic006G013900 Sobic002G331300 Sobic002G331300 Sobic004G137900--Sobic002G331300 Sobic001G286300 Sobic001G286300 Sobic004G137900--Sobic001G286300 Sobic009G120100 Sobic009G120100 Sobic004G137900--Sobic009G120100 Sobic003G129800 Sobic003G129800 Sobic004G137900--Sobic003G129800 Sobic005G111100 Sobic005G111100 Sobic004G137900--Sobic005G111100 Sobic002G257400 Sobic002G257400 Sobic004G204800--Sobic002G257400 Sobic004G204800--Sobic007G152400 Sobic004G204800--Sobic004G335000 Sobic004G204800--Sobic003G043400 Sobic010G266300 Sobic010G266300 Sobic004G204800--Sobic010G266300 Sobic001G058100 Sobic001G058100 Sobic004G204800--Sobic001G058100 Sobic004G204800--Sobic002G428200 Sobic003G428200 Sobic003G428200 Sobic004G204800--Sobic003G428200 Sobic004G204800--Sobic001G010700 Sobic009G201800 Sobic009G201800 Sobic002G044000--Sobic009G201800 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic004G032000 Sobic004G032000 Sobic002G044000--Sobic004G032000 Sobic001G126200 Sobic001G126200 Sobic002G044000--Sobic001G126200 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic008G058700 Sobic008G058700 Sobic003G126800--Sobic008G058700 Sobic003G252900 Sobic003G252900 Sobic003G126800--Sobic003G252900 Sobic003G126800--Sobic010G088300 Sobic003G126800--Sobic003G031200 Sobic003G126800--Sobic009G070200 Sobic004G297300 Sobic004G297300 Sobic003G126800--Sobic004G297300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G039200 Sobic003G039200 Sobic003G126800--Sobic003G039200
Octagon: transcription factors


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