Gene annotation
Transcriptome id Sobic.003G031200.1
Synonym Sb03g002920
Functional annotation translation initiation factor SUI1, putative, expressed
UniProt C5XLV9
Pfam PF01253
Panther DB PTHR12789
NCBI CDD KOG3239; Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1)
KEGG Orthology -
Gene Ontology GO:0006413; translational initiation GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT5G11900 : Translation initiation factor SUI1 family protein
RAP-DB (Rice) LOC_Os01g09890.1 : translation initiation factor SUI1, putative, expressed
MaizeGDB (Corn) Zm00025a023009 , Zm00025a035829
Brachypodium KQK03160
Barley HORVU3Hr1G019010.4 , HORVU3Hr1G019010.1 , HORVU3Hr1G019010.2 , HORVU3Hr1G019010.3
Wheat TraesCS3B02G123000 , TraesCS3B02G123000 , TraesCS3D02G106700 , TraesCS3A02G104500 , TraesCS3A02G104500
Populus -


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cDNA sequences
Sobic.003G031200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
2 Sobic.004G242100 expressed protein -
3 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
4 Sobic.008G111700 expressed protein -
5 Sobic.002G129200 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
6 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
7 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
8 Sobic.001G402600 expressed protein -
9 Sobic.001G285300 expressed protein -
10 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1
11 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
12 Sobic.001G199300 GIL1, putative, expressed -
13 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1
14 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
15 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
16 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
17 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
19 Sobic.004G010700 expressed protein -
20 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1


Gene co-expression network
sample Sobic003G031200 Sobic003G031200 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic002G359900 Sobic002G359900 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic010G088300--Sobic003G031200 Sobic010G088300--Sobic003G043400 Sobic001G199300 Sobic001G199300 Sobic010G088300--Sobic001G199300 Sobic001G434400 Sobic001G434400 Sobic010G088300--Sobic001G434400 Sobic002G423800 Sobic002G423800 Sobic010G088300--Sobic002G423800 Sobic004G137900 Sobic004G137900 Sobic010G088300--Sobic004G137900 Sobic004G204800 Sobic004G204800 Sobic010G088300--Sobic004G204800 Sobic010G088300--Sobic002G044000 Sobic003G126800 Sobic003G126800 Sobic010G088300--Sobic003G126800 Sobic004G242100--Sobic001G402600 Sobic004G242100--Sobic003G031200 Sobic003G435000 Sobic003G435000 Sobic004G242100--Sobic003G435000 Sobic001G544100 Sobic001G544100 Sobic004G242100--Sobic001G544100 Sobic006G236500 Sobic006G236500 Sobic004G242100--Sobic006G236500 Sobic009G016500 Sobic009G016500 Sobic004G242100--Sobic009G016500 Sobic004G012800 Sobic004G012800 Sobic004G242100--Sobic004G012800 Sobic007G037000 Sobic007G037000 Sobic004G242100--Sobic007G037000 Sobic004G242100--Sobic001G434400 Sobic010G253100 Sobic010G253100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic006G261100 Sobic006G261100 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000 Sobic008G111700--Sobic001G285300 Sobic003G038600 Sobic003G038600 Sobic008G111700--Sobic003G038600 Sobic001G448200 Sobic001G448200 Sobic008G111700--Sobic001G448200 Sobic001G349400 Sobic001G349400 Sobic008G111700--Sobic001G349400 Sobic003G247900 Sobic003G247900 Sobic008G111700--Sobic003G247900 Sobic008G111700--Sobic003G031200 Sobic008G111700--Sobic003G043400 Sobic006G094600 Sobic006G094600 Sobic008G111700--Sobic006G094600 Sobic008G111700--Sobic006G261100 Sobic002G129200--Sobic003G031200 Sobic010G220900 Sobic010G220900 Sobic002G129200--Sobic010G220900 Sobic002G129200--Sobic002G359900 Sobic006G011000 Sobic006G011000 Sobic002G129200--Sobic006G011000 Sobic002G129200--Sobic003G436500 Sobic001G382200 Sobic001G382200 Sobic002G129200--Sobic001G382200 Sobic004G010700 Sobic004G010700 Sobic002G129200--Sobic004G010700 Sobic002G083800 Sobic002G083800 Sobic002G129200--Sobic002G083800 Sobic009G201800 Sobic009G201800 Sobic002G129200--Sobic009G201800 Sobic002G044000--Sobic009G201800 Sobic003G358300 Sobic003G358300 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic004G032000 Sobic004G032000 Sobic002G044000--Sobic004G032000 Sobic001G126200 Sobic001G126200 Sobic002G044000--Sobic001G126200 Sobic007G152400 Sobic007G152400 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic003G043400--Sobic002G423800 Sobic001G010700 Sobic001G010700 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic004G335000 Sobic004G335000 Sobic003G043400--Sobic004G335000 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic001G402600--Sobic004G242100 Sobic007G192100 Sobic007G192100 Sobic001G402600--Sobic007G192100 Sobic001G402600--Sobic001G126200 Sobic007G092100 Sobic007G092100 Sobic001G402600--Sobic007G092100 Sobic001G402600--Sobic003G358300 Sobic001G402600--Sobic006G143500 Sobic001G402600--Sobic001G285300 Sobic003G224300 Sobic003G224300 Sobic001G402600--Sobic003G224300 Sobic007G073600 Sobic007G073600 Sobic001G402600--Sobic007G073600 Sobic001G285300--Sobic008G111700 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic001G285300--Sobic002G044000 Sobic001G036700 Sobic001G036700 Sobic001G285300--Sobic001G036700 Sobic001G285300--Sobic001G126200 Sobic003G420700 Sobic003G420700 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic001G285300--Sobic006G094600
Octagon: transcription factors


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