Gene annotation
Transcriptome id Sobic.001G199300.1
Synonym Sb01g017570
Functional annotation GIL1, putative, expressed
UniProt C5WWA8
Pfam PF04859
Panther DB PTHR31161 PTHR31161:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60680 : Plant protein of unknown function (DUF641)
RAP-DB (Rice) LOC_Os10g36400.1 : GIL1, putative, expressed
MaizeGDB (Corn) Zm00025a053472 , Zm00025a006377 , Zm00025a017470 , Zm00025a021868
Brachypodium KQJ97383
Barley HORVU1Hr1G046710.1 , HORVU1Hr1G046710.3 , HORVU1Hr1G046710.2
Wheat -
Populus -


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cDNA sequences
Sobic.001G199300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
2 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
3 Sobic.005G187500 GRF-interacting factor 2, putative, expressed -
4 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
5 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
6 Sobic.003G307900 BSD domain containing protein, expressed -
7 Sobic.003G190800 GA18326-PA, putative, expressed -
8 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
9 Sobic.004G242100 expressed protein -
10 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
11 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
12 Sobic.001G285300 expressed protein -
13 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
14 Sobic.005G206700 WD domain, G-beta repeat domain containing protein, expressed K12602: WDR61, REC14, WD repeat-containing protein 61
15 Sobic.004G010700 expressed protein -
16 Sobic.006G079900 COP9 signalosome complex subunit 8, putative, expressed K12181: COPS8, COP9 signalosome complex subunit 8
17 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
18 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
19 Sobic.006G276200 F-box domain containing protein, expressed -
20 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G199300 Sobic001G199300 Sobic010G088300 Sobic010G088300 Sobic001G199300--Sobic010G088300 Sobic003G043400 Sobic003G043400 Sobic001G199300--Sobic003G043400 Sobic005G187500 Sobic005G187500 Sobic001G199300--Sobic005G187500 Sobic003G031200 Sobic003G031200 Sobic001G199300--Sobic003G031200 Sobic001G544100 Sobic001G544100 Sobic001G199300--Sobic001G544100 Sobic003G307900 Sobic003G307900 Sobic001G199300--Sobic003G307900 Sobic003G190800 Sobic003G190800 Sobic001G199300--Sobic003G190800 Sobic001G434400 Sobic001G434400 Sobic001G199300--Sobic001G434400 Sobic004G242100 Sobic004G242100 Sobic001G199300--Sobic004G242100 Sobic010G088300--Sobic003G031200 Sobic010G088300--Sobic003G043400 Sobic010G088300--Sobic001G199300 Sobic010G088300--Sobic001G434400 Sobic002G423800 Sobic002G423800 Sobic010G088300--Sobic002G423800 Sobic004G137900 Sobic004G137900 Sobic010G088300--Sobic004G137900 Sobic004G204800 Sobic004G204800 Sobic010G088300--Sobic004G204800 Sobic002G044000 Sobic002G044000 Sobic010G088300--Sobic002G044000 Sobic003G126800 Sobic003G126800 Sobic010G088300--Sobic003G126800 Sobic003G043400--Sobic002G423800 Sobic001G010700 Sobic001G010700 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic004G335000 Sobic004G335000 Sobic003G043400--Sobic004G335000 Sobic007G152400 Sobic007G152400 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic001G038100 Sobic001G038100 Sobic005G187500--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic005G187500--Sobic002G204000 Sobic003G405700 Sobic003G405700 Sobic005G187500--Sobic003G405700 Sobic001G507400 Sobic001G507400 Sobic005G187500--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic005G187500--Sobic006G120800 Sobic006G183000 Sobic006G183000 Sobic005G187500--Sobic006G183000 Sobic005G187500--Sobic003G307900 Sobic002G359900 Sobic002G359900 Sobic005G187500--Sobic002G359900 Sobic005G187500--Sobic001G199300 Sobic003G031200--Sobic010G088300 Sobic003G031200--Sobic004G242100 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic003G031200--Sobic002G044000 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic001G544100--Sobic004G242100 Sobic001G544100--Sobic004G137900 Sobic001G544100--Sobic001G532100 Sobic002G279000 Sobic002G279000 Sobic001G544100--Sobic002G279000 Sobic004G260400 Sobic004G260400 Sobic001G544100--Sobic004G260400 Sobic001G094500 Sobic001G094500 Sobic001G544100--Sobic001G094500 Sobic004G012800 Sobic004G012800 Sobic001G544100--Sobic004G012800 Sobic006G276200 Sobic006G276200 Sobic001G544100--Sobic006G276200 Sobic001G009800 Sobic001G009800 Sobic001G544100--Sobic001G009800 Sobic003G083900 Sobic003G083900 Sobic003G307900--Sobic003G083900 Sobic008G125000 Sobic008G125000 Sobic003G307900--Sobic008G125000 Sobic004G133700 Sobic004G133700 Sobic003G307900--Sobic004G133700 Sobic001G370300 Sobic001G370300 Sobic003G307900--Sobic001G370300 Sobic006G087100 Sobic006G087100 Sobic003G307900--Sobic006G087100 Sobic004G057800 Sobic004G057800 Sobic003G307900--Sobic004G057800 Sobic003G307900--Sobic001G285300 Sobic003G307900--Sobic005G187500 Sobic007G010900 Sobic007G010900 Sobic003G307900--Sobic007G010900 Sobic006G079900 Sobic006G079900 Sobic003G190800--Sobic006G079900 Sobic009G124400 Sobic009G124400 Sobic003G190800--Sobic009G124400 Sobic009G258600 Sobic009G258600 Sobic003G190800--Sobic009G258600 Sobic003G367900 Sobic003G367900 Sobic003G190800--Sobic003G367900 Sobic003G190800--Sobic002G279000 Sobic005G206700 Sobic005G206700 Sobic003G190800--Sobic005G206700 Sobic006G231700 Sobic006G231700 Sobic003G190800--Sobic006G231700 Sobic003G190800--Sobic004G137900 Sobic003G190800--Sobic001G199300 Sobic001G434400--Sobic006G276200 Sobic001G434400--Sobic010G088300 Sobic001G434400--Sobic004G012800 Sobic006G231500 Sobic006G231500 Sobic001G434400--Sobic006G231500 Sobic001G434400--Sobic004G242100 Sobic001G434400--Sobic004G137900 Sobic006G109700 Sobic006G109700 Sobic001G434400--Sobic006G109700 Sobic001G130400 Sobic001G130400 Sobic001G434400--Sobic001G130400 Sobic005G110526 Sobic005G110526 Sobic001G434400--Sobic005G110526 Sobic004G242100--Sobic001G402600 Sobic004G242100--Sobic003G031200 Sobic003G435000 Sobic003G435000 Sobic004G242100--Sobic003G435000 Sobic004G242100--Sobic001G544100 Sobic006G236500 Sobic006G236500 Sobic004G242100--Sobic006G236500 Sobic009G016500 Sobic009G016500 Sobic004G242100--Sobic009G016500 Sobic004G242100--Sobic004G012800 Sobic007G037000 Sobic007G037000 Sobic004G242100--Sobic007G037000 Sobic004G242100--Sobic001G434400
Octagon: transcription factors


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