Gene annotation
Transcriptome id Sobic.001G544100.1
Synonym Sb01g050640
Functional annotation peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed
UniProt A0A1Z5SCF2
Pfam PF00160
Panther DB PTHR33344
NCBI CDD KOG0884; Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT4G17070 : peptidyl-prolyl cis-trans isomerases
RAP-DB (Rice) LOC_Os03g01090.1 : peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed
MaizeGDB (Corn) Zm00025a053616
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G544100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242100 expressed protein -
2 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
3 Sobic.001G532100 proteasome subunit, putative, expressed K12175: GPS1, COPS1, COP9 signalosome complex subunit 1
4 Sobic.002G279000 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
5 Sobic.004G260400 expressed protein K07018: uncharacterized protein
6 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
8 Sobic.006G276200 F-box domain containing protein, expressed -
9 Sobic.001G009800 N-rich protein, putative, expressed -
10 Sobic.006G143500 expressed protein -
11 Sobic.001G199300 GIL1, putative, expressed -
12 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
13 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
14 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
15 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
16 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
17 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
18 Sobic.002G254650 - -
19 Sobic.001G285300 expressed protein -
20 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1


Gene co-expression network
sample Sobic001G544100 Sobic001G544100 Sobic004G242100 Sobic004G242100 Sobic001G544100--Sobic004G242100 Sobic004G137900 Sobic004G137900 Sobic001G544100--Sobic004G137900 Sobic001G532100 Sobic001G532100 Sobic001G544100--Sobic001G532100 Sobic002G279000 Sobic002G279000 Sobic001G544100--Sobic002G279000 Sobic004G260400 Sobic004G260400 Sobic001G544100--Sobic004G260400 Sobic001G094500 Sobic001G094500 Sobic001G544100--Sobic001G094500 Sobic004G012800 Sobic004G012800 Sobic001G544100--Sobic004G012800 Sobic006G276200 Sobic006G276200 Sobic001G544100--Sobic006G276200 Sobic001G009800 Sobic001G009800 Sobic001G544100--Sobic001G009800 Sobic001G402600 Sobic001G402600 Sobic004G242100--Sobic001G402600 Sobic003G031200 Sobic003G031200 Sobic004G242100--Sobic003G031200 Sobic003G435000 Sobic003G435000 Sobic004G242100--Sobic003G435000 Sobic004G242100--Sobic001G544100 Sobic006G236500 Sobic006G236500 Sobic004G242100--Sobic006G236500 Sobic009G016500 Sobic009G016500 Sobic004G242100--Sobic009G016500 Sobic004G242100--Sobic004G012800 Sobic007G037000 Sobic007G037000 Sobic004G242100--Sobic007G037000 Sobic001G434400 Sobic001G434400 Sobic004G242100--Sobic001G434400 Sobic004G137900--Sobic004G012800 Sobic006G231700 Sobic006G231700 Sobic004G137900--Sobic006G231700 Sobic003G358300 Sobic003G358300 Sobic004G137900--Sobic003G358300 Sobic006G013900 Sobic006G013900 Sobic004G137900--Sobic006G013900 Sobic002G331300 Sobic002G331300 Sobic004G137900--Sobic002G331300 Sobic001G286300 Sobic001G286300 Sobic004G137900--Sobic001G286300 Sobic009G120100 Sobic009G120100 Sobic004G137900--Sobic009G120100 Sobic003G129800 Sobic003G129800 Sobic004G137900--Sobic003G129800 Sobic005G111100 Sobic005G111100 Sobic004G137900--Sobic005G111100 Sobic008G137600 Sobic008G137600 Sobic001G532100--Sobic008G137600 Sobic001G036700 Sobic001G036700 Sobic001G532100--Sobic001G036700 Sobic010G193800 Sobic010G193800 Sobic001G532100--Sobic010G193800 Sobic001G285300 Sobic001G285300 Sobic001G532100--Sobic001G285300 Sobic001G294900 Sobic001G294900 Sobic001G532100--Sobic001G294900 Sobic007G152400 Sobic007G152400 Sobic001G532100--Sobic007G152400 Sobic006G225300 Sobic006G225300 Sobic001G532100--Sobic006G225300 Sobic003G043400 Sobic003G043400 Sobic001G532100--Sobic003G043400 Sobic003G273400 Sobic003G273400 Sobic001G532100--Sobic003G273400 Sobic002G279000--Sobic001G094500 Sobic002G279000--Sobic004G137900 Sobic002G279000--Sobic001G544100 Sobic002G279000--Sobic006G231700 Sobic002G279000--Sobic001G532100 Sobic003G190800 Sobic003G190800 Sobic002G279000--Sobic003G190800 Sobic002G279000--Sobic004G012800 Sobic002G279000--Sobic007G152400 Sobic004G175700 Sobic004G175700 Sobic002G279000--Sobic004G175700 Sobic001G038100 Sobic001G038100 Sobic004G260400--Sobic001G038100 Sobic004G260400--Sobic001G009800 Sobic006G183000 Sobic006G183000 Sobic004G260400--Sobic006G183000 Sobic004G186000 Sobic004G186000 Sobic004G260400--Sobic004G186000 Sobic001G309100 Sobic001G309100 Sobic004G260400--Sobic001G309100 Sobic004G260400--Sobic001G544100 Sobic003G405700 Sobic003G405700 Sobic004G260400--Sobic003G405700 Sobic003G045400 Sobic003G045400 Sobic004G260400--Sobic003G045400 Sobic002G204000 Sobic002G204000 Sobic004G260400--Sobic002G204000 Sobic001G094500--Sobic006G231700 Sobic001G128400 Sobic001G128400 Sobic001G094500--Sobic001G128400 Sobic001G094500--Sobic005G111100 Sobic004G265700 Sobic004G265700 Sobic001G094500--Sobic004G265700 Sobic001G094500--Sobic002G279000 Sobic001G094500--Sobic001G532100 Sobic001G094500--Sobic007G152400 Sobic001G529000 Sobic001G529000 Sobic001G094500--Sobic001G529000 Sobic007G163700 Sobic007G163700 Sobic001G094500--Sobic007G163700 Sobic004G012800--Sobic004G137900 Sobic006G231500 Sobic006G231500 Sobic004G012800--Sobic006G231500 Sobic004G012800--Sobic006G231700 Sobic009G001900 Sobic009G001900 Sobic004G012800--Sobic009G001900 Sobic002G254650 Sobic002G254650 Sobic004G012800--Sobic002G254650 Sobic004G012800--Sobic005G111100 Sobic004G012800--Sobic003G358300 Sobic006G094600 Sobic006G094600 Sobic004G012800--Sobic006G094600 Sobic004G012800--Sobic001G532100 Sobic006G276200--Sobic001G434400 Sobic006G276200--Sobic001G544100 Sobic010G088300 Sobic010G088300 Sobic006G276200--Sobic010G088300 Sobic006G276200--Sobic002G279000 Sobic006G276200--Sobic004G242100 Sobic001G136500 Sobic001G136500 Sobic006G276200--Sobic001G136500 Sobic003G003000 Sobic003G003000 Sobic006G276200--Sobic003G003000 Sobic001G199300 Sobic001G199300 Sobic006G276200--Sobic001G199300 Sobic007G043600 Sobic007G043600 Sobic006G276200--Sobic007G043600 Sobic001G009800--Sobic010G193800 Sobic001G152000 Sobic001G152000 Sobic001G009800--Sobic001G152000 Sobic001G009800--Sobic006G183000 Sobic002G268400 Sobic002G268400 Sobic001G009800--Sobic002G268400 Sobic001G009800--Sobic001G038100 Sobic001G009800--Sobic001G532100 Sobic001G009800--Sobic004G260400 Sobic001G009800--Sobic003G405700 Sobic009G140700 Sobic009G140700 Sobic001G009800--Sobic009G140700
Octagon: transcription factors


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