Gene annotation
Transcriptome id Sobic.004G260400.1
Synonym Sb04g029880
Functional annotation expressed protein
UniProt C5XZW0
Pfam PF12695
Panther DB PTHR12277 PTHR12277:SF75
NCBI CDD -
KEGG Orthology K07018; uncharacterized protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19630 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g48590.1 : expressed protein
MaizeGDB (Corn) Zm00025a021814
Brachypodium KQK01029
Barley HORVU6Hr1G070500.6 , HORVU6Hr1G070500.7 , HORVU6Hr1G070500.4 , HORVU6Hr1G070500.5 , HORVU6Hr1G070500.2 , HORVU6Hr1G070500.3 , HORVU6Hr1G070500.1
Wheat TraesCS6A02G280400 , TraesCS6D02G260600 , TraesCS6B02G309100
Populus -


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cDNA sequences
Sobic.004G260400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.001G009800 N-rich protein, putative, expressed -
3 Sobic.006G183000 RING zinc finger protein, putative, expressed -
4 Sobic.004G186000 salt tolerant protein, putative, expressed -
5 Sobic.001G309100 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
6 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
7 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
8 Sobic.003G045400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
9 Sobic.002G204000 26S proteasome non-ATPase regulatory subunit 9, putative, expressed K06693: PSMD9, 26S proteasome regulatory subunit N4
10 Sobic.001G350501 - K11253: histone H3
11 Sobic.001G543300 dehydrogenase, putative, expressed -
12 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
13 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
14 Sobic.001G218800 expressed protein -
15 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta
16 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
17 Sobic.002G329300 basic helix-loop-helix DND-binding domain containing protein, expressed -
18 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
19 Sobic.001G080000 expressed protein -
20 Sobic.010G219100 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic004G260400 Sobic004G260400 Sobic001G038100 Sobic001G038100 Sobic004G260400--Sobic001G038100 Sobic001G009800 Sobic001G009800 Sobic004G260400--Sobic001G009800 Sobic006G183000 Sobic006G183000 Sobic004G260400--Sobic006G183000 Sobic004G186000 Sobic004G186000 Sobic004G260400--Sobic004G186000 Sobic001G309100 Sobic001G309100 Sobic004G260400--Sobic001G309100 Sobic001G544100 Sobic001G544100 Sobic004G260400--Sobic001G544100 Sobic003G405700 Sobic003G405700 Sobic004G260400--Sobic003G405700 Sobic003G045400 Sobic003G045400 Sobic004G260400--Sobic003G045400 Sobic002G204000 Sobic002G204000 Sobic004G260400--Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic007G117100 Sobic007G117100 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic001G038100--Sobic004G260400 Sobic010G193800 Sobic010G193800 Sobic001G009800--Sobic010G193800 Sobic001G152000 Sobic001G152000 Sobic001G009800--Sobic001G152000 Sobic001G009800--Sobic006G183000 Sobic002G268400 Sobic002G268400 Sobic001G009800--Sobic002G268400 Sobic001G009800--Sobic001G038100 Sobic001G532100 Sobic001G532100 Sobic001G009800--Sobic001G532100 Sobic001G009800--Sobic004G260400 Sobic001G009800--Sobic003G405700 Sobic009G140700 Sobic009G140700 Sobic001G009800--Sobic009G140700 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600 Sobic004G186000--Sobic002G204000 Sobic004G186000--Sobic001G038100 Sobic008G128600 Sobic008G128600 Sobic004G186000--Sobic008G128600 Sobic010G028300 Sobic010G028300 Sobic004G186000--Sobic010G028300 Sobic001G473600 Sobic001G473600 Sobic004G186000--Sobic001G473600 Sobic006G252300 Sobic006G252300 Sobic004G186000--Sobic006G252300 Sobic007G191700 Sobic007G191700 Sobic004G186000--Sobic007G191700 Sobic004G186000--Sobic001G507400 Sobic001G131800 Sobic001G131800 Sobic004G186000--Sobic001G131800 Sobic001G309100--Sobic001G038100 Sobic003G024800 Sobic003G024800 Sobic001G309100--Sobic003G024800 Sobic003G101300 Sobic003G101300 Sobic001G309100--Sobic003G101300 Sobic003G189900 Sobic003G189900 Sobic001G309100--Sobic003G189900 Sobic001G390500 Sobic001G390500 Sobic001G309100--Sobic001G390500 Sobic010G071200 Sobic010G071200 Sobic001G309100--Sobic010G071200 Sobic003G437500 Sobic003G437500 Sobic001G309100--Sobic003G437500 Sobic001G350501 Sobic001G350501 Sobic001G309100--Sobic001G350501 Sobic001G309100--Sobic007G117100 Sobic004G242100 Sobic004G242100 Sobic001G544100--Sobic004G242100 Sobic004G137900 Sobic004G137900 Sobic001G544100--Sobic004G137900 Sobic001G544100--Sobic001G532100 Sobic002G279000 Sobic002G279000 Sobic001G544100--Sobic002G279000 Sobic001G544100--Sobic004G260400 Sobic001G094500 Sobic001G094500 Sobic001G544100--Sobic001G094500 Sobic004G012800 Sobic004G012800 Sobic001G544100--Sobic004G012800 Sobic006G276200 Sobic006G276200 Sobic001G544100--Sobic006G276200 Sobic001G544100--Sobic001G009800 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic001G080000 Sobic001G080000 Sobic003G405700--Sobic001G080000 Sobic003G405700--Sobic006G183000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic003G405700--Sobic009G050700 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic002G272600 Sobic002G272600 Sobic003G405700--Sobic002G272600 Sobic001G467000 Sobic001G467000 Sobic003G045400--Sobic001G467000 Sobic006G242300 Sobic006G242300 Sobic003G045400--Sobic006G242300 Sobic010G211300 Sobic010G211300 Sobic003G045400--Sobic010G211300 Sobic008G139700 Sobic008G139700 Sobic003G045400--Sobic008G139700 Sobic002G313500 Sobic002G313500 Sobic003G045400--Sobic002G313500 Sobic001G307900 Sobic001G307900 Sobic003G045400--Sobic001G307900 Sobic004G072800 Sobic004G072800 Sobic003G045400--Sobic004G072800 Sobic003G045400--Sobic009G140700 Sobic001G143500 Sobic001G143500 Sobic003G045400--Sobic001G143500 Sobic002G204000--Sobic001G038100 Sobic002G204000--Sobic004G186000 Sobic004G316900 Sobic004G316900 Sobic002G204000--Sobic004G316900 Sobic004G019600 Sobic004G019600 Sobic002G204000--Sobic004G019600 Sobic001G329300 Sobic001G329300 Sobic002G204000--Sobic001G329300 Sobic002G204000--Sobic010G193800 Sobic004G226800 Sobic004G226800 Sobic002G204000--Sobic004G226800 Sobic002G204000--Sobic001G136900 Sobic002G204000--Sobic001G507400
Octagon: transcription factors


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