Gene annotation
Transcriptome id Sobic.001G218800.2
Synonym Sb01g019240
Functional annotation expressed protein
UniProt A0A1Z5S6R9
Pfam -
Panther DB PTHR36353:SF1 PTHR36353
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37035 : -
RAP-DB (Rice) LOC_Os10g33820.1 : expressed protein
MaizeGDB (Corn) Zm00025a006592 , Zm00025a017618
Brachypodium -
Barley HORVU1Hr1G041440.1 , HORVU1Hr1G041440.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
2 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
3 Sobic.010G176500 expressed protein -
4 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
5 Sobic.010G000300 transmembrane BAX inhibitor motif-containing protein, putative, expressed -
6 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
7 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
8 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
9 Sobic.009G108500 acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
10 Sobic.004G186000 salt tolerant protein, putative, expressed -
11 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
12 Sobic.006G183000 RING zinc finger protein, putative, expressed -
13 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
14 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.009G001100 expressed protein -
16 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
17 Sobic.003G273400 glycylpeptide N-tetradecanoyltransferase 1, putative, expressed K00671: glycylpeptide N-tetradecanoyltransferase
18 Sobic.001G114500 ATP binding protein, putative, expressed K06883: uncharacterized protein
19 Sobic.004G091200 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
20 Sobic.002G242200 expressed protein -


Gene co-expression network
sample Sobic001G218800 Sobic001G218800 Sobic010G108900 Sobic010G108900 Sobic001G218800--Sobic010G108900 Sobic003G004700 Sobic003G004700 Sobic001G218800--Sobic003G004700 Sobic010G176500 Sobic010G176500 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G380500 Sobic001G380500 Sobic001G218800--Sobic001G380500 Sobic006G087100 Sobic006G087100 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic009G108500 Sobic009G108500 Sobic001G218800--Sobic009G108500 Sobic010G108900--Sobic001G380500 Sobic010G108900--Sobic001G218800 Sobic006G168400 Sobic006G168400 Sobic010G108900--Sobic006G168400 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic003G004700--Sobic001G218800 Sobic003G004700--Sobic010G108900 Sobic003G004700--Sobic010G176500 Sobic003G004700--Sobic001G380500 Sobic003G004700--Sobic009G108500 Sobic003G004700--Sobic006G109700 Sobic002G039000 Sobic002G039000 Sobic003G004700--Sobic002G039000 Sobic001G263000 Sobic001G263000 Sobic003G004700--Sobic001G263000 Sobic003G004700--Sobic006G087100 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic008G103300 Sobic008G103300 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic010G176500--Sobic006G233300 Sobic003G122500 Sobic003G122500 Sobic003G123000--Sobic003G122500 Sobic004G095300 Sobic004G095300 Sobic003G123000--Sobic004G095300 Sobic001G222900 Sobic001G222900 Sobic003G123000--Sobic001G222900 Sobic010G171100 Sobic010G171100 Sobic003G123000--Sobic010G171100 Sobic002G280600 Sobic002G280600 Sobic003G123000--Sobic002G280600 Sobic004G246700 Sobic004G246700 Sobic003G123000--Sobic004G246700 Sobic003G123000--Sobic001G218800 Sobic008G165700 Sobic008G165700 Sobic003G123000--Sobic008G165700 Sobic001G473600 Sobic001G473600 Sobic003G123000--Sobic001G473600 Sobic007G166100 Sobic007G166100 Sobic010G000300--Sobic007G166100 Sobic010G000300--Sobic001G218800 Sobic010G037400 Sobic010G037400 Sobic010G000300--Sobic010G037400 Sobic002G347000 Sobic002G347000 Sobic010G000300--Sobic002G347000 Sobic010G000300--Sobic003G123000 Sobic001G114500 Sobic001G114500 Sobic010G000300--Sobic001G114500 Sobic003G071000 Sobic003G071000 Sobic010G000300--Sobic003G071000 Sobic003G273400 Sobic003G273400 Sobic010G000300--Sobic003G273400 Sobic009G049300 Sobic009G049300 Sobic010G000300--Sobic009G049300 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G380500--Sobic001G218800 Sobic001G380500--Sobic002G039000 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic010G220900 Sobic010G220900 Sobic006G087100--Sobic010G220900 Sobic004G019600 Sobic004G019600 Sobic006G087100--Sobic004G019600 Sobic001G346300 Sobic001G346300 Sobic006G087100--Sobic001G346300 Sobic006G087100--Sobic009G108500 Sobic008G118500 Sobic008G118500 Sobic006G087100--Sobic008G118500 Sobic004G133700 Sobic004G133700 Sobic006G087100--Sobic004G133700 Sobic006G087100--Sobic001G218800 Sobic003G122000 Sobic003G122000 Sobic006G087100--Sobic003G122000 Sobic002G359900 Sobic002G359900 Sobic006G087100--Sobic002G359900 Sobic006G010000 Sobic006G010000 Sobic006G233300--Sobic006G010000 Sobic002G143900 Sobic002G143900 Sobic006G233300--Sobic002G143900 Sobic006G233000 Sobic006G233000 Sobic006G233300--Sobic006G233000 Sobic003G158700 Sobic003G158700 Sobic006G233300--Sobic003G158700 Sobic002G394800 Sobic002G394800 Sobic006G233300--Sobic002G394800 Sobic006G233300--Sobic003G099300 Sobic010G239800 Sobic010G239800 Sobic006G233300--Sobic010G239800 Sobic010G247400 Sobic010G247400 Sobic006G233300--Sobic010G247400 Sobic006G233300--Sobic002G280600 Sobic009G108500--Sobic006G183000 Sobic009G108500--Sobic006G087100 Sobic001G532100 Sobic001G532100 Sobic009G108500--Sobic001G532100 Sobic001G189600 Sobic001G189600 Sobic009G108500--Sobic001G189600 Sobic001G294900 Sobic001G294900 Sobic009G108500--Sobic001G294900 Sobic009G108500--Sobic006G109700 Sobic009G108500--Sobic010G108900 Sobic006G225300 Sobic006G225300 Sobic009G108500--Sobic006G225300 Sobic006G203100 Sobic006G203100 Sobic009G108500--Sobic006G203100
Octagon: transcription factors


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