Gene annotation
Transcriptome id Sobic.001G380500.1
Synonym Sb01g036100
Functional annotation appr-1-p processing enzyme family protein, putative, expressed
UniProt A0A1B6QND3
Pfam PF01661
Panther DB PTHR11106
NCBI CDD KOG2633; Hismacro and SEC14 domain-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40600 : appr-1-p processing enzyme family protein
RAP-DB (Rice) LOC_Os03g21830.1 : appr-1-p processing enzyme family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002354
Brachypodium KQK21795
Barley HORVU4Hr1G050130.3 , HORVU4Hr1G050130.2 , HORVU4Hr1G050130.1
Wheat TraesCS4A02G135800 , TraesCS4B02G169200 , TraesCS4D02G171400 , TraesCS4D02G171400
Populus -


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cDNA sequences
Sobic.001G380500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
2 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
3 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
4 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
5 Sobic.001G218800 expressed protein -
6 Sobic.002G039000 ML domain protein, putative, expressed -
7 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
8 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
9 Sobic.002G404200 F-box domain containing protein, expressed -
10 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
11 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
12 Sobic.007G209800 3-oxoacyl-reductase, chloroplast precursor, putative, expressed -
13 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
14 Sobic.001G004700 expressed protein -
15 Sobic.009G065200 zinc finger family protein, putative, expressed -
16 Sobic.007G067700 RNA recognition motif containing protein, putative, expressed -
17 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
18 Sobic.001G120500 toc64, putative, expressed -
19 Sobic.010G176500 expressed protein -
20 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -


Gene co-expression network
sample Sobic001G380500 Sobic001G380500 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic009G029700--Sobic001G380500 Sobic004G268100 Sobic004G268100 Sobic009G029700--Sobic004G268100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic001G437200 Sobic001G437200 Sobic009G029700--Sobic001G437200 Sobic009G029700--Sobic002G039000 Sobic003G310100 Sobic003G310100 Sobic009G029700--Sobic003G310100 Sobic002G281800 Sobic002G281800 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic010G108900--Sobic001G380500 Sobic010G108900--Sobic001G218800 Sobic010G108900--Sobic006G168400 Sobic003G004700 Sobic003G004700 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic009G108500 Sobic009G108500 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic007G168200--Sobic001G380500 Sobic009G190800 Sobic009G190800 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic001G294200 Sobic001G294200 Sobic007G168200--Sobic001G294200 Sobic006G269000 Sobic006G269000 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic007G029100--Sobic002G404200 Sobic007G029100--Sobic009G029700 Sobic007G029100--Sobic001G380500 Sobic010G113000 Sobic010G113000 Sobic007G029100--Sobic010G113000 Sobic010G080300 Sobic010G080300 Sobic007G029100--Sobic010G080300 Sobic007G029100--Sobic001G341800 Sobic007G029100--Sobic002G281800 Sobic007G073700 Sobic007G073700 Sobic007G029100--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic007G029100--Sobic005G064800 Sobic001G218800--Sobic010G108900 Sobic001G218800--Sobic003G004700 Sobic010G176500 Sobic010G176500 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G218800--Sobic001G380500 Sobic006G087100 Sobic006G087100 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic001G218800--Sobic009G108500 Sobic001G263000 Sobic001G263000 Sobic002G039000--Sobic001G263000 Sobic006G244700 Sobic006G244700 Sobic002G039000--Sobic006G244700 Sobic010G090900 Sobic010G090900 Sobic002G039000--Sobic010G090900 Sobic002G039000--Sobic001G380500 Sobic009G004600 Sobic009G004600 Sobic002G039000--Sobic009G004600 Sobic002G039000--Sobic009G029700 Sobic009G243100 Sobic009G243100 Sobic002G039000--Sobic009G243100 Sobic003G239800 Sobic003G239800 Sobic002G039000--Sobic003G239800 Sobic004G348900 Sobic004G348900 Sobic002G039000--Sobic004G348900 Sobic006G168400--Sobic010G108900 Sobic006G168400--Sobic001G380500 Sobic006G168400--Sobic002G262000 Sobic002G333100 Sobic002G333100 Sobic006G168400--Sobic002G333100 Sobic006G168400--Sobic003G004700 Sobic006G168400--Sobic006G183000 Sobic001G463500 Sobic001G463500 Sobic006G168400--Sobic001G463500 Sobic006G168400--Sobic006G109700 Sobic006G168400--Sobic001G218800 Sobic001G418800--Sobic001G380500 Sobic001G418800--Sobic001G218800 Sobic002G174900 Sobic002G174900 Sobic001G418800--Sobic002G174900 Sobic006G028300 Sobic006G028300 Sobic001G418800--Sobic006G028300 Sobic001G418800--Sobic010G108900 Sobic001G151900 Sobic001G151900 Sobic001G418800--Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G418800--Sobic001G222900 Sobic001G418800--Sobic003G004700 Sobic002G339500 Sobic002G339500 Sobic001G418800--Sobic002G339500 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic010G100800 Sobic010G100800 Sobic002G404200--Sobic010G100800 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic010G086900 Sobic010G086900 Sobic002G404200--Sobic010G086900 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800
Octagon: transcription factors


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