Gene annotation
Transcriptome id Sobic.001G004700.1
Synonym Sb01g000520
Functional annotation expressed protein
UniProt C5WRX1
Pfam -
Panther DB PTHR35106
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65000 : -
RAP-DB (Rice) LOC_Os03g64060.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK12000 , KQK12001
Barley -
Wheat TraesCS5D02G568600 , TraesCS4A02G318200 , TraesCS5B02G561200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
2 Sobic.003G078800 PB1 domain containing protein, expressed -
3 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
4 Sobic.006G171700 - -
5 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
6 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
7 Sobic.006G119800 leucine rich repeat containing protein, expressed -
8 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
9 Sobic.007G171950 - -
10 Sobic.004G156400 LSM domain containing protein, expressed K12621: U6 snRNA-associated Sm-like protein LSm2
11 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
12 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
13 Sobic.002G242200 expressed protein -
14 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
15 Sobic.009G070100 expressed protein -
16 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.004G028000 expressed protein -
18 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
19 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
20 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta


Gene co-expression network
sample Sobic001G004700 Sobic001G004700 Sobic002G122600 Sobic002G122600 Sobic001G004700--Sobic002G122600 Sobic003G078800 Sobic003G078800 Sobic001G004700--Sobic003G078800 Sobic004G227300 Sobic004G227300 Sobic001G004700--Sobic004G227300 Sobic006G171700 Sobic006G171700 Sobic001G004700--Sobic006G171700 Sobic001G380500 Sobic001G380500 Sobic001G004700--Sobic001G380500 Sobic003G299000 Sobic003G299000 Sobic001G004700--Sobic003G299000 Sobic006G119800 Sobic006G119800 Sobic001G004700--Sobic006G119800 Sobic006G004600 Sobic006G004600 Sobic001G004700--Sobic006G004600 Sobic007G171950 Sobic007G171950 Sobic001G004700--Sobic007G171950 Sobic001G281600 Sobic001G281600 Sobic002G122600--Sobic001G281600 Sobic009G215800 Sobic009G215800 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic001G294200 Sobic001G294200 Sobic003G078800--Sobic001G294200 Sobic003G078800--Sobic002G122600 Sobic001G372000 Sobic001G372000 Sobic003G078800--Sobic001G372000 Sobic006G228700 Sobic006G228700 Sobic003G078800--Sobic006G228700 Sobic006G264500 Sobic006G264500 Sobic003G078800--Sobic006G264500 Sobic010G067700 Sobic010G067700 Sobic003G078800--Sobic010G067700 Sobic003G078800--Sobic001G004700 Sobic009G157200 Sobic009G157200 Sobic003G078800--Sobic009G157200 Sobic006G047100 Sobic006G047100 Sobic003G078800--Sobic006G047100 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic001G261597 Sobic001G261597 Sobic004G227300--Sobic001G261597 Sobic004G227300--Sobic006G171700 Sobic003G359900 Sobic003G359900 Sobic004G227300--Sobic003G359900 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic004G227300--Sobic006G119800 Sobic006G171700--Sobic004G227300 Sobic003G123000 Sobic003G123000 Sobic006G171700--Sobic003G123000 Sobic006G171700--Sobic002G122600 Sobic008G165700 Sobic008G165700 Sobic006G171700--Sobic008G165700 Sobic010G280100 Sobic010G280100 Sobic006G171700--Sobic010G280100 Sobic006G171700--Sobic001G429300 Sobic006G171700--Sobic009G017400 Sobic006G171700--Sobic010G268300 Sobic002G174900 Sobic002G174900 Sobic006G171700--Sobic002G174900 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic003G077900 Sobic003G077900 Sobic003G299000--Sobic003G077900 Sobic004G348900 Sobic004G348900 Sobic003G299000--Sobic004G348900 Sobic001G206900 Sobic001G206900 Sobic003G299000--Sobic001G206900 Sobic003G436300 Sobic003G436300 Sobic003G299000--Sobic003G436300 Sobic003G299000--Sobic004G227300 Sobic001G417900 Sobic001G417900 Sobic003G299000--Sobic001G417900 Sobic002G418700 Sobic002G418700 Sobic003G299000--Sobic002G418700 Sobic003G217400 Sobic003G217400 Sobic003G299000--Sobic003G217400 Sobic002G242200 Sobic002G242200 Sobic003G299000--Sobic002G242200 Sobic006G119800--Sobic001G281600 Sobic001G387600 Sobic001G387600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic007G019800 Sobic007G019800 Sobic006G119800--Sobic007G019800 Sobic006G273200 Sobic006G273200 Sobic006G119800--Sobic006G273200 Sobic010G068500 Sobic010G068500 Sobic006G119800--Sobic010G068500 Sobic004G301900 Sobic004G301900 Sobic006G119800--Sobic004G301900 Sobic004G119100 Sobic004G119100 Sobic006G119800--Sobic004G119100 Sobic009G233300 Sobic009G233300 Sobic006G119800--Sobic009G233300 Sobic006G004600--Sobic001G427500 Sobic010G265800 Sobic010G265800 Sobic006G004600--Sobic010G265800 Sobic007G007000 Sobic007G007000 Sobic006G004600--Sobic007G007000 Sobic002G251700 Sobic002G251700 Sobic006G004600--Sobic002G251700 Sobic003G314500 Sobic003G314500 Sobic006G004600--Sobic003G314500 Sobic006G269000 Sobic006G269000 Sobic006G004600--Sobic006G269000 Sobic006G004600--Sobic001G004700 Sobic006G004600--Sobic001G387600 Sobic004G210900 Sobic004G210900 Sobic006G004600--Sobic004G210900 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G095500 Sobic007G095500 Sobic007G171950--Sobic007G095500 Sobic007G171950--Sobic002G122600 Sobic001G296400 Sobic001G296400 Sobic007G171950--Sobic001G296400 Sobic007G171950--Sobic010G108900 Sobic009G207100 Sobic009G207100 Sobic007G171950--Sobic009G207100 Sobic001G263000 Sobic001G263000 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500
Octagon: transcription factors


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