Gene annotation
Transcriptome id Sobic.007G168200.1
Synonym Sb07g024100
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5YN67
Pfam PF00160
Panther DB PTHR11071 PTHR11071:SF270
NCBI CDD KOG0881; Cyclophilin type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K12733; peptidyl-prolyl cis-trans isomerase-like 1
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT2G36130 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os08g44520.3 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a005598
Brachypodium KQJ99376
Barley HORVU7Hr1G059320.2 , HORVU7Hr1G059320.3 , HORVU7Hr1G059320.1 , HORVU7Hr1G059320.4 , HORVU7Hr1G059320.5
Wheat TraesCS7A02G279300 , TraesCS7D02G279100 , TraesCS7D02G279100 , TraesCS7B02G180900
Populus -


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cDNA sequences
Sobic.007G168200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
2 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
3 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
5 Sobic.006G269000 protein kinase, putative, expressed -
6 Sobic.009G065200 zinc finger family protein, putative, expressed -
7 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
8 Sobic.004G214100 "BC14(Ortholog in rice:Zhang et al., 2011)"(PubMedID : 31659885)@transporter family protein, putative, expressed K15281: solute carrier family 35
9 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
10 Sobic.002G404200 F-box domain containing protein, expressed -
11 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
12 Sobic.006G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.001G004700 expressed protein -
14 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
15 Sobic.007G110200 wound responsive protein, putative, expressed -
16 Sobic.001G543300 dehydrogenase, putative, expressed -
17 Sobic.008G171800 WD domain, G-beta repeat domain containing protein, expressed K14830: MAK11, protein MAK11
18 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
19 Sobic.003G078800 PB1 domain containing protein, expressed -
20 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -


Gene co-expression network
sample Sobic007G168200 Sobic007G168200 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic009G190800 Sobic009G190800 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic001G294200 Sobic001G294200 Sobic007G168200--Sobic001G294200 Sobic006G269000 Sobic006G269000 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic003G359900 Sobic003G359900 Sobic009G190800--Sobic003G359900 Sobic009G190800--Sobic003G103200 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic009G190800--Sobic007G168200 Sobic001G039800--Sobic007G168200 Sobic003G138600 Sobic003G138600 Sobic001G039800--Sobic003G138600 Sobic002G242200 Sobic002G242200 Sobic001G039800--Sobic002G242200 Sobic001G039800--Sobic009G190800 Sobic001G039800--Sobic006G269000 Sobic004G060600 Sobic004G060600 Sobic001G039800--Sobic004G060600 Sobic001G039800--Sobic010G108900 Sobic001G039800--Sobic001G294200 Sobic001G039800--Sobic001G218800 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic009G133400 Sobic009G133400 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic002G137300 Sobic002G137300 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic003G261900 Sobic003G261900 Sobic006G269000--Sobic003G261900 Sobic006G269000--Sobic007G168200 Sobic006G269000--Sobic002G242200 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic006G126200 Sobic006G126200 Sobic009G065200--Sobic006G126200 Sobic009G065200--Sobic001G380500 Sobic009G065200--Sobic007G168200 Sobic008G080000 Sobic008G080000 Sobic009G065200--Sobic008G080000 Sobic009G065200--Sobic001G543300 Sobic009G065200--Sobic001G294200 Sobic008G103900 Sobic008G103900 Sobic009G065200--Sobic008G103900 Sobic001G202400 Sobic001G202400 Sobic009G065200--Sobic001G202400 Sobic009G193850 Sobic009G193850 Sobic009G065200--Sobic009G193850 Sobic001G341800--Sobic009G190800 Sobic001G341800--Sobic002G404200 Sobic001G341800--Sobic007G029100 Sobic001G202500 Sobic001G202500 Sobic001G341800--Sobic001G202500 Sobic009G036300 Sobic009G036300 Sobic001G341800--Sobic009G036300 Sobic001G324400 Sobic001G324400 Sobic001G341800--Sobic001G324400 Sobic001G341800--Sobic002G281800 Sobic001G341800--Sobic007G168200 Sobic001G367500 Sobic001G367500 Sobic001G341800--Sobic001G367500 Sobic004G214100--Sobic001G022600 Sobic004G227300 Sobic004G227300 Sobic004G214100--Sobic004G227300 Sobic004G214100--Sobic009G190800 Sobic001G261597 Sobic001G261597 Sobic004G214100--Sobic001G261597 Sobic004G214100--Sobic003G359900 Sobic004G214100--Sobic006G269000 Sobic004G214100--Sobic007G168200 Sobic001G427500 Sobic001G427500 Sobic004G214100--Sobic001G427500 Sobic010G009400 Sobic010G009400 Sobic004G214100--Sobic010G009400 Sobic003G103200--Sobic009G190800 Sobic003G103200--Sobic002G137300 Sobic006G024500 Sobic006G024500 Sobic003G103200--Sobic006G024500 Sobic008G081300 Sobic008G081300 Sobic003G103200--Sobic008G081300 Sobic005G044400 Sobic005G044400 Sobic003G103200--Sobic005G044400 Sobic008G193300 Sobic008G193300 Sobic003G103200--Sobic008G193300 Sobic009G141400 Sobic009G141400 Sobic003G103200--Sobic009G141400 Sobic002G181300 Sobic002G181300 Sobic003G103200--Sobic002G181300 Sobic008G144800 Sobic008G144800 Sobic003G103200--Sobic008G144800
Octagon: transcription factors


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