Gene annotation
Transcriptome id Sobic.001G341800.1
Synonym Sb01g032840
Functional annotation von Willebrand factor type A domain containing protein, expressed
UniProt C5WWP3
Pfam PF13768
Panther DB PTHR10338 PTHR10338:SF125
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19110 : inter-alpha-trypsin inhibitor heavy chain-related
RAP-DB (Rice) LOC_Os03g29350.1 : von Willebrand factor type A domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048751 , Zm00025a002804 , Zm00025a015198
Brachypodium KQK15269 , KQK15268 , KQK15270 , KQK15271 , KQK21327 , KQK21328
Barley HORVU2Hr1G031470.11 , HORVU2Hr1G031470.12 , HORVU5Hr1G013290.10 , HORVU5Hr1G013290.11 , HORVU5Hr1G013290.12 , HORVU5Hr1G013290.8 , HORVU5Hr1G013290.9 , HORVU5Hr1G013290.6 , HORVU5Hr1G013290.7 , HORVU5Hr1G013290.4 , HORVU5Hr1G013290.5 , HORVU5Hr1G013290.2 , HORVU5Hr1G013290.3 , HORVU5Hr1G013290.1 , HORVU2Hr1G031470.6 , HORVU2Hr1G031470.1 , HORVU2Hr1G031470.3 , HORVU2Hr1G031470.2 , HORVU2Hr1G031470.9
Wheat TraesCS2A02G170000 , TraesCS5B02G061700 , TraesCS2B02G196300 , TraesCS2B02G196300 , TraesCS5D02G066000 , TraesCS2D02G177500 , TraesCS2D02G177500 , TraesCS5A02G054800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
2 Sobic.002G404200 F-box domain containing protein, expressed -
3 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
4 Sobic.001G202500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
5 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
6 Sobic.001G324400 thymidine kinase, putative, expressed K00857: tdk, thymidine kinase
7 Sobic.002G281800 expressed protein -
8 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
9 Sobic.001G367500 arginyl-tRNA synthetase, putative, expressed -
10 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
11 Sobic.003G249100 HMG1/2, putative, expressed -
12 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
13 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.003G381300 expressed protein -
15 Sobic.003G359900 C2 domain containing protein, expressed -
16 Sobic.004G287300 polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
17 Sobic.004G147200 - -
18 Sobic.003G324100 haloacid dehalogenase, putative, expressed K01094: phosphatidylglycerophosphatase GEP4
19 Sobic.001G416300 expressed protein -
20 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase


Gene co-expression network
sample Sobic001G341800 Sobic001G341800 Sobic009G190800 Sobic009G190800 Sobic001G341800--Sobic009G190800 Sobic002G404200 Sobic002G404200 Sobic001G341800--Sobic002G404200 Sobic007G029100 Sobic007G029100 Sobic001G341800--Sobic007G029100 Sobic001G202500 Sobic001G202500 Sobic001G341800--Sobic001G202500 Sobic009G036300 Sobic009G036300 Sobic001G341800--Sobic009G036300 Sobic001G324400 Sobic001G324400 Sobic001G341800--Sobic001G324400 Sobic002G281800 Sobic002G281800 Sobic001G341800--Sobic002G281800 Sobic007G168200 Sobic007G168200 Sobic001G341800--Sobic007G168200 Sobic001G367500 Sobic001G367500 Sobic001G341800--Sobic001G367500 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic003G359900 Sobic003G359900 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic004G214100 Sobic004G214100 Sobic009G190800--Sobic004G214100 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic009G190800--Sobic007G168200 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic010G100800 Sobic010G100800 Sobic002G404200--Sobic010G100800 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic010G086900 Sobic010G086900 Sobic002G404200--Sobic010G086900 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic007G029100--Sobic002G404200 Sobic009G029700 Sobic009G029700 Sobic007G029100--Sobic009G029700 Sobic001G380500 Sobic001G380500 Sobic007G029100--Sobic001G380500 Sobic010G113000 Sobic010G113000 Sobic007G029100--Sobic010G113000 Sobic010G080300 Sobic010G080300 Sobic007G029100--Sobic010G080300 Sobic007G029100--Sobic001G341800 Sobic007G029100--Sobic002G281800 Sobic007G073700 Sobic007G073700 Sobic007G029100--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic007G029100--Sobic005G064800 Sobic004G297500 Sobic004G297500 Sobic001G202500--Sobic004G297500 Sobic001G161400 Sobic001G161400 Sobic001G202500--Sobic001G161400 Sobic001G202500--Sobic009G029700 Sobic001G202500--Sobic001G341800 Sobic003G283800 Sobic003G283800 Sobic001G202500--Sobic003G283800 Sobic003G310100 Sobic003G310100 Sobic001G202500--Sobic003G310100 Sobic001G437200 Sobic001G437200 Sobic001G202500--Sobic001G437200 Sobic001G202500--Sobic002G404200 Sobic004G268100 Sobic004G268100 Sobic001G202500--Sobic004G268100 Sobic007G227600 Sobic007G227600 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic003G170200 Sobic003G170200 Sobic001G324400--Sobic003G170200 Sobic010G189200 Sobic010G189200 Sobic001G324400--Sobic010G189200 Sobic004G152100 Sobic004G152100 Sobic001G324400--Sobic004G152100 Sobic001G324400--Sobic001G341800 Sobic001G324400--Sobic001G437200 Sobic001G324400--Sobic002G281800 Sobic004G287300 Sobic004G287300 Sobic001G324400--Sobic004G287300 Sobic009G094800 Sobic009G094800 Sobic001G324400--Sobic009G094800 Sobic009G148900 Sobic009G148900 Sobic001G324400--Sobic009G148900 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic002G281800--Sobic007G029100 Sobic002G281800--Sobic009G190800 Sobic002G281800--Sobic003G310100 Sobic002G281800--Sobic004G152100 Sobic002G281800--Sobic009G029700 Sobic007G168200--Sobic001G380500 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic001G294200 Sobic001G294200 Sobic007G168200--Sobic001G294200 Sobic006G269000 Sobic006G269000 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic007G168200--Sobic001G341800 Sobic007G168200--Sobic004G214100 Sobic007G168200--Sobic003G103200 Sobic005G145300 Sobic005G145300 Sobic001G367500--Sobic005G145300 Sobic009G238100 Sobic009G238100 Sobic001G367500--Sobic009G238100 Sobic001G367500--Sobic009G036300 Sobic006G186000 Sobic006G186000 Sobic001G367500--Sobic006G186000 Sobic003G332900 Sobic003G332900 Sobic001G367500--Sobic003G332900 Sobic001G367500--Sobic010G074100 Sobic008G148400 Sobic008G148400 Sobic001G367500--Sobic008G148400 Sobic003G030400 Sobic003G030400 Sobic001G367500--Sobic003G030400 Sobic001G367500--Sobic010G074200
Octagon: transcription factors


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