Gene annotation
Transcriptome id Sobic.003G381300.2
Synonym Sb03g042100
Functional annotation expressed protein
UniProt A0A1W0W0W8
Pfam -
Panther DB PTHR34201 PTHR34201:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10330 : glycine-rich protein
RAP-DB (Rice) LOC_Os01g66320.1 : expressed protein
MaizeGDB (Corn) Zm00025a026517
Brachypodium KQK10949
Barley HORVU3Hr1G090690.1 , HORVU3Hr1G090690.3 , HORVU3Hr1G090690.2
Wheat TraesCS3B02G437600 , TraesCS3B02G437600 , TraesCS3A02G404100 , TraesCS3A02G404100 , TraesCS3D02G399300 , TraesCS3D02G399300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G216900 expressed protein -
2 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
3 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
4 Sobic.002G142066 - K18045: SIW14, tyrosine-protein phosphatase SIW14
5 Sobic.002G163700 expressed protein -
6 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
7 Sobic.001G416300 expressed protein -
8 Sobic.009G004800 - -
9 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
10 Sobic.007G132500 F-box domain containing protein, expressed -
11 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
12 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
13 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
14 Sobic.008G151000 wall-associated receptor kinase 3 precursor, putative, expressed -
15 Sobic.003G368800 expressed protein -
16 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
17 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
18 Sobic.009G141400 transcriptional regulator, putative, expressed -
19 Sobic.001G388400 expressed protein -
20 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G381300 Sobic003G381300 Sobic006G216900 Sobic006G216900 Sobic003G381300--Sobic006G216900 Sobic010G080300 Sobic010G080300 Sobic003G381300--Sobic010G080300 Sobic010G231100 Sobic010G231100 Sobic003G381300--Sobic010G231100 Sobic002G142066 Sobic002G142066 Sobic003G381300--Sobic002G142066 Sobic002G163700 Sobic002G163700 Sobic003G381300--Sobic002G163700 Sobic009G036300 Sobic009G036300 Sobic003G381300--Sobic009G036300 Sobic001G416300 Sobic001G416300 Sobic003G381300--Sobic001G416300 Sobic009G004800 Sobic009G004800 Sobic003G381300--Sobic009G004800 Sobic001G341800 Sobic001G341800 Sobic003G381300--Sobic001G341800 Sobic006G216900--Sobic003G381300 Sobic003G135800 Sobic003G135800 Sobic006G216900--Sobic003G135800 Sobic008G142600 Sobic008G142600 Sobic006G216900--Sobic008G142600 Sobic002G366100 Sobic002G366100 Sobic006G216900--Sobic002G366100 Sobic003G206800 Sobic003G206800 Sobic006G216900--Sobic003G206800 Sobic001G445900 Sobic001G445900 Sobic006G216900--Sobic001G445900 Sobic002G174900 Sobic002G174900 Sobic006G216900--Sobic002G174900 Sobic003G402200 Sobic003G402200 Sobic006G216900--Sobic003G402200 Sobic006G060800 Sobic006G060800 Sobic006G216900--Sobic006G060800 Sobic002G281800 Sobic002G281800 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100 Sobic003G179400 Sobic003G179400 Sobic010G231100--Sobic003G179400 Sobic001G207200 Sobic001G207200 Sobic010G231100--Sobic001G207200 Sobic006G214700 Sobic006G214700 Sobic010G231100--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic010G231100--Sobic005G028900 Sobic010G231100--Sobic009G036300 Sobic009G079950 Sobic009G079950 Sobic010G231100--Sobic009G079950 Sobic009G141400 Sobic009G141400 Sobic010G231100--Sobic009G141400 Sobic006G024500 Sobic006G024500 Sobic010G231100--Sobic006G024500 Sobic001G450600 Sobic001G450600 Sobic010G231100--Sobic001G450600 Sobic002G404200 Sobic002G404200 Sobic002G142066--Sobic002G404200 Sobic004G224500 Sobic004G224500 Sobic002G142066--Sobic004G224500 Sobic002G142066--Sobic009G141400 Sobic002G142066--Sobic008G063200 Sobic002G142066--Sobic006G214700 Sobic002G142066--Sobic003G179400 Sobic001G006000 Sobic001G006000 Sobic002G142066--Sobic001G006000 Sobic003G208300 Sobic003G208300 Sobic002G142066--Sobic003G208300 Sobic002G142066--Sobic008G193300 Sobic003G439600 Sobic003G439600 Sobic002G163700--Sobic003G439600 Sobic002G163700--Sobic001G450600 Sobic007G227600 Sobic007G227600 Sobic002G163700--Sobic007G227600 Sobic002G163700--Sobic006G214700 Sobic002G250100 Sobic002G250100 Sobic002G163700--Sobic002G250100 Sobic006G197700 Sobic006G197700 Sobic002G163700--Sobic006G197700 Sobic002G386400 Sobic002G386400 Sobic002G163700--Sobic002G386400 Sobic002G038300 Sobic002G038300 Sobic002G163700--Sobic002G038300 Sobic003G245800 Sobic003G245800 Sobic002G163700--Sobic003G245800 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic009G036300--Sobic002G163700 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G427700 Sobic001G427700 Sobic001G416300--Sobic001G427700 Sobic004G018400 Sobic004G018400 Sobic001G416300--Sobic004G018400 Sobic009G190800 Sobic009G190800 Sobic001G416300--Sobic009G190800 Sobic001G416300--Sobic003G402200 Sobic005G089000 Sobic005G089000 Sobic001G416300--Sobic005G089000 Sobic001G416300--Sobic008G142600 Sobic009G004800--Sobic002G163700 Sobic009G004800--Sobic009G036300 Sobic003G330100 Sobic003G330100 Sobic009G004800--Sobic003G330100 Sobic009G004800--Sobic001G388400 Sobic009G004800--Sobic003G310100 Sobic009G004800--Sobic010G028000 Sobic009G046800 Sobic009G046800 Sobic009G004800--Sobic009G046800 Sobic009G004800--Sobic009G234200 Sobic009G004800--Sobic001G450600 Sobic001G341800--Sobic009G190800 Sobic001G341800--Sobic002G404200 Sobic001G341800--Sobic007G029100 Sobic001G202500 Sobic001G202500 Sobic001G341800--Sobic001G202500 Sobic001G341800--Sobic009G036300 Sobic001G324400 Sobic001G324400 Sobic001G341800--Sobic001G324400 Sobic001G341800--Sobic002G281800 Sobic007G168200 Sobic007G168200 Sobic001G341800--Sobic007G168200 Sobic001G367500 Sobic001G367500 Sobic001G341800--Sobic001G367500
Octagon: transcription factors


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