Gene annotation
Transcriptome id Sobic.006G216900.2
Synonym Sb06g028680
Functional annotation expressed protein
UniProt A0A1Z5RFX5
Pfam -
Panther DB PTHR33177 PTHR33177:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16500 : -
RAP-DB (Rice) LOC_Os04g52700.1 : expressed protein
MaizeGDB (Corn) Zm00025a009762
Brachypodium -
Barley HORVU2Hr1G104300.1 , HORVU2Hr1G104300.2
Wheat TraesCS2A02G459300 , TraesCS2B02G480800 , TraesCS2D02G459600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G381300 expressed protein -
2 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
3 Sobic.008G142600 amino acid permease family protein, putative, expressed -
4 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
5 Sobic.003G206800 DUF538 domain containing protein, putative, expressed -
6 Sobic.001G445900 "CYP90B2(Ortholog in rice:Wu et al., 2008)"(PubMedID : 31659844)@cytochrome P450, putative, expressed K09587: CYP90B1, steroid 22-alpha-hydroxylase
7 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
8 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
9 Sobic.006G060800 basic proline-rich protein, putative, expressed -
10 Sobic.003G096500 protein kinase domain containing protein, expressed -
11 Sobic.007G191900 ACT domain containing protein, expressed -
12 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
13 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
15 Sobic.001G145050 - -
16 Sobic.003G151800 expressed protein -
17 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
18 Sobic.002G251300 uroporphyrinogen-III synthase, putative, expressed -
19 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
20 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -


Gene co-expression network
sample Sobic006G216900 Sobic006G216900 Sobic003G381300 Sobic003G381300 Sobic006G216900--Sobic003G381300 Sobic003G135800 Sobic003G135800 Sobic006G216900--Sobic003G135800 Sobic008G142600 Sobic008G142600 Sobic006G216900--Sobic008G142600 Sobic002G366100 Sobic002G366100 Sobic006G216900--Sobic002G366100 Sobic003G206800 Sobic003G206800 Sobic006G216900--Sobic003G206800 Sobic001G445900 Sobic001G445900 Sobic006G216900--Sobic001G445900 Sobic002G174900 Sobic002G174900 Sobic006G216900--Sobic002G174900 Sobic003G402200 Sobic003G402200 Sobic006G216900--Sobic003G402200 Sobic006G060800 Sobic006G060800 Sobic006G216900--Sobic006G060800 Sobic003G381300--Sobic006G216900 Sobic010G080300 Sobic010G080300 Sobic003G381300--Sobic010G080300 Sobic010G231100 Sobic010G231100 Sobic003G381300--Sobic010G231100 Sobic002G142066 Sobic002G142066 Sobic003G381300--Sobic002G142066 Sobic002G163700 Sobic002G163700 Sobic003G381300--Sobic002G163700 Sobic009G036300 Sobic009G036300 Sobic003G381300--Sobic009G036300 Sobic001G416300 Sobic001G416300 Sobic003G381300--Sobic001G416300 Sobic009G004800 Sobic009G004800 Sobic003G381300--Sobic009G004800 Sobic001G341800 Sobic001G341800 Sobic003G381300--Sobic001G341800 Sobic005G190900 Sobic005G190900 Sobic003G135800--Sobic005G190900 Sobic004G078600 Sobic004G078600 Sobic003G135800--Sobic004G078600 Sobic002G371900 Sobic002G371900 Sobic003G135800--Sobic002G371900 Sobic001G019300 Sobic001G019300 Sobic003G135800--Sobic001G019300 Sobic002G281000 Sobic002G281000 Sobic003G135800--Sobic002G281000 Sobic005G089000 Sobic005G089000 Sobic003G135800--Sobic005G089000 Sobic003G096500 Sobic003G096500 Sobic003G135800--Sobic003G096500 Sobic002G265400 Sobic002G265400 Sobic003G135800--Sobic002G265400 Sobic004G063200 Sobic004G063200 Sobic003G135800--Sobic004G063200 Sobic001G427700 Sobic001G427700 Sobic008G142600--Sobic001G427700 Sobic002G271600 Sobic002G271600 Sobic008G142600--Sobic002G271600 Sobic008G142600--Sobic003G402200 Sobic001G321600 Sobic001G321600 Sobic008G142600--Sobic001G321600 Sobic001G022600 Sobic001G022600 Sobic008G142600--Sobic001G022600 Sobic008G142600--Sobic001G416300 Sobic008G111300 Sobic008G111300 Sobic008G142600--Sobic008G111300 Sobic008G142600--Sobic002G366100 Sobic009G190800 Sobic009G190800 Sobic008G142600--Sobic009G190800 Sobic002G195700 Sobic002G195700 Sobic002G366100--Sobic002G195700 Sobic001G145050 Sobic001G145050 Sobic002G366100--Sobic001G145050 Sobic001G005500 Sobic001G005500 Sobic002G366100--Sobic001G005500 Sobic009G255100 Sobic009G255100 Sobic002G366100--Sobic009G255100 Sobic002G366100--Sobic006G060800 Sobic002G366100--Sobic001G321600 Sobic005G021600 Sobic005G021600 Sobic002G366100--Sobic005G021600 Sobic004G068700 Sobic004G068700 Sobic002G366100--Sobic004G068700 Sobic001G404500 Sobic001G404500 Sobic002G366100--Sobic001G404500 Sobic002G048800 Sobic002G048800 Sobic003G206800--Sobic002G048800 Sobic001G320200 Sobic001G320200 Sobic003G206800--Sobic001G320200 Sobic001G340700 Sobic001G340700 Sobic003G206800--Sobic001G340700 Sobic003G314500 Sobic003G314500 Sobic003G206800--Sobic003G314500 Sobic002G130700 Sobic002G130700 Sobic003G206800--Sobic002G130700 Sobic008G001400 Sobic008G001400 Sobic003G206800--Sobic008G001400 Sobic002G073900 Sobic002G073900 Sobic003G206800--Sobic002G073900 Sobic003G206800--Sobic008G142600 Sobic001G427200 Sobic001G427200 Sobic003G206800--Sobic001G427200 Sobic001G179100 Sobic001G179100 Sobic001G445900--Sobic001G179100 Sobic004G187300 Sobic004G187300 Sobic001G445900--Sobic004G187300 Sobic001G445900--Sobic006G216900 Sobic001G030500 Sobic001G030500 Sobic001G445900--Sobic001G030500 Sobic002G253400 Sobic002G253400 Sobic001G445900--Sobic002G253400 Sobic009G205600 Sobic009G205600 Sobic001G445900--Sobic009G205600 Sobic003G214000 Sobic003G214000 Sobic001G445900--Sobic003G214000 Sobic003G248901 Sobic003G248901 Sobic001G445900--Sobic003G248901 Sobic003G153800 Sobic003G153800 Sobic001G445900--Sobic003G153800 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G040800 Sobic002G040800 Sobic002G174900--Sobic002G040800 Sobic008G165700 Sobic008G165700 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic006G171700 Sobic006G171700 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic001G279200 Sobic001G279200 Sobic002G174900--Sobic001G279200 Sobic003G402200--Sobic001G145050 Sobic003G402200--Sobic009G205600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic001G320700 Sobic001G320700 Sobic003G402200--Sobic001G320700 Sobic001G201800 Sobic001G201800 Sobic003G402200--Sobic001G201800 Sobic003G402200--Sobic001G427700 Sobic003G402200--Sobic005G089000 Sobic003G402200--Sobic008G111300 Sobic008G060300 Sobic008G060300 Sobic006G060800--Sobic008G060300 Sobic009G252100 Sobic009G252100 Sobic006G060800--Sobic009G252100 Sobic002G041800 Sobic002G041800 Sobic006G060800--Sobic002G041800 Sobic006G060800--Sobic004G063200 Sobic006G060800--Sobic001G201800 Sobic006G060800--Sobic004G078600 Sobic007G089300 Sobic007G089300 Sobic006G060800--Sobic007G089300 Sobic006G060800--Sobic001G145050 Sobic006G060800--Sobic002G366100
Octagon: transcription factors


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