Gene annotation
Transcriptome id Sobic.008G142600.1
Synonym Sb08g019330
Functional annotation amino acid permease family protein, putative, expressed
UniProt C5YQF8
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF366
NCBI CDD KOG1287; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT3G19553 : Amino acid permease family protein
RAP-DB (Rice) LOC_Os12g39080.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a004372
Brachypodium KQJ86145
Barley HORVU5Hr1G019110.5 , HORVU5Hr1G019110.4 , HORVU5Hr1G019110.3 , HORVU5Hr1G019110.2 , HORVU5Hr1G019110.1
Wheat TraesCS5D02G085800 , TraesCS5B02G079100 , TraesCS5A02G073000
Populus -


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cDNA sequences
Sobic.008G142600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
2 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
4 Sobic.001G321600 dehydration response related protein, putative, expressed -
5 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
6 Sobic.001G416300 expressed protein -
7 Sobic.008G111300 transporter family protein, putative, expressed -
8 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
10 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
11 Sobic.001G121100 integral membrane protein, putative, expressed -
12 Sobic.003G359900 C2 domain containing protein, expressed -
13 Sobic.001G145050 - -
14 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
15 Sobic.005G093300 - -
16 Sobic.002G257100 regulatory protein, putative, expressed -
17 Sobic.003G213900 expressed protein -
18 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
19 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
20 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein


Gene co-expression network
sample Sobic008G142600 Sobic008G142600 Sobic001G427700 Sobic001G427700 Sobic008G142600--Sobic001G427700 Sobic002G271600 Sobic002G271600 Sobic008G142600--Sobic002G271600 Sobic003G402200 Sobic003G402200 Sobic008G142600--Sobic003G402200 Sobic001G321600 Sobic001G321600 Sobic008G142600--Sobic001G321600 Sobic001G022600 Sobic001G022600 Sobic008G142600--Sobic001G022600 Sobic001G416300 Sobic001G416300 Sobic008G142600--Sobic001G416300 Sobic008G111300 Sobic008G111300 Sobic008G142600--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic008G142600--Sobic002G366100 Sobic009G190800 Sobic009G190800 Sobic008G142600--Sobic009G190800 Sobic001G427700--Sobic008G142600 Sobic001G427700--Sobic003G402200 Sobic004G018400 Sobic004G018400 Sobic001G427700--Sobic004G018400 Sobic001G320700 Sobic001G320700 Sobic001G427700--Sobic001G320700 Sobic001G427700--Sobic001G416300 Sobic003G213900 Sobic003G213900 Sobic001G427700--Sobic003G213900 Sobic001G315800 Sobic001G315800 Sobic001G427700--Sobic001G315800 Sobic004G217700 Sobic004G217700 Sobic001G427700--Sobic004G217700 Sobic010G214200 Sobic010G214200 Sobic001G427700--Sobic010G214200 Sobic007G014600 Sobic007G014600 Sobic002G271600--Sobic007G014600 Sobic002G209100 Sobic002G209100 Sobic002G271600--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G271600--Sobic002G041800 Sobic002G271600--Sobic004G217700 Sobic001G145050 Sobic001G145050 Sobic002G271600--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic002G271600--Sobic009G205600 Sobic006G053700 Sobic006G053700 Sobic002G271600--Sobic006G053700 Sobic004G195800 Sobic004G195800 Sobic002G271600--Sobic004G195800 Sobic002G271600--Sobic002G366100 Sobic003G402200--Sobic001G145050 Sobic003G402200--Sobic009G205600 Sobic004G078600 Sobic004G078600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic003G402200--Sobic001G320700 Sobic001G201800 Sobic001G201800 Sobic003G402200--Sobic001G201800 Sobic003G402200--Sobic001G427700 Sobic005G089000 Sobic005G089000 Sobic003G402200--Sobic005G089000 Sobic003G402200--Sobic008G111300 Sobic001G005500 Sobic001G005500 Sobic001G321600--Sobic001G005500 Sobic001G019300 Sobic001G019300 Sobic001G321600--Sobic001G019300 Sobic002G195700 Sobic002G195700 Sobic001G321600--Sobic002G195700 Sobic010G089200 Sobic010G089200 Sobic001G321600--Sobic010G089200 Sobic008G073400 Sobic008G073400 Sobic001G321600--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic001G321600--Sobic001G520100 Sobic002G281000 Sobic002G281000 Sobic001G321600--Sobic002G281000 Sobic003G237000 Sobic003G237000 Sobic001G321600--Sobic003G237000 Sobic001G321600--Sobic002G366100 Sobic001G022600--Sobic009G190800 Sobic004G214100 Sobic004G214100 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G022600--Sobic001G427700 Sobic003G359900 Sobic003G359900 Sobic001G022600--Sobic003G359900 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G416300--Sobic001G427700 Sobic001G416300--Sobic004G018400 Sobic001G416300--Sobic009G190800 Sobic001G416300--Sobic003G402200 Sobic001G416300--Sobic005G089000 Sobic001G416300--Sobic008G142600 Sobic004G068700 Sobic004G068700 Sobic008G111300--Sobic004G068700 Sobic003G214000 Sobic003G214000 Sobic008G111300--Sobic003G214000 Sobic001G179100 Sobic001G179100 Sobic008G111300--Sobic001G179100 Sobic008G111300--Sobic004G078600 Sobic008G111300--Sobic001G201800 Sobic003G361900 Sobic003G361900 Sobic008G111300--Sobic003G361900 Sobic008G111300--Sobic001G320700 Sobic004G209500 Sobic004G209500 Sobic008G111300--Sobic004G209500 Sobic008G111300--Sobic003G402200 Sobic002G366100--Sobic002G195700 Sobic002G366100--Sobic001G145050 Sobic002G366100--Sobic001G005500 Sobic009G255100 Sobic009G255100 Sobic002G366100--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic002G366100--Sobic006G060800 Sobic002G366100--Sobic001G321600 Sobic005G021600 Sobic005G021600 Sobic002G366100--Sobic005G021600 Sobic002G366100--Sobic004G068700 Sobic001G404500 Sobic001G404500 Sobic002G366100--Sobic001G404500 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic009G190800--Sobic001G022600 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic009G190800--Sobic001G416300 Sobic007G168200 Sobic007G168200 Sobic009G190800--Sobic007G168200
Octagon: transcription factors


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