Gene annotation
Transcriptome id Sobic.001G416300.3,Sobic.001G416300.1,Sobic.001G416300.2
Synonym Sb01g039200
Functional annotation expressed protein
UniProt C5WPB9 , A0A1B6QP05
Pfam -
Panther DB PTHR35286 PTHR35286:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53630 : -
RAP-DB (Rice) LOC_Os03g17140.1 : expressed protein
MaizeGDB (Corn) Zm00025a001884
Brachypodium PNT77653
Barley -
Wheat TraesCS4B02G203800
Populus -


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cDNA sequences
Sobic.001G416300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G170200 amino acid kinase, putative, expressed K00930: acetylglutamate kinase
2 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
3 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
5 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
6 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
7 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
8 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.008G142600 amino acid permease family protein, putative, expressed -
10 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -
11 Sobic.001G475701 - -
12 Sobic.008G111300 transporter family protein, putative, expressed -
13 Sobic.002G142066 - K18045: SIW14, tyrosine-protein phosphatase SIW14
14 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
15 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
16 Sobic.002G281800 expressed protein -
17 Sobic.003G291400 dehydrogenase, putative, expressed -
18 Sobic.001G400300 heat shock protein DnaJ, putative, expressed -
19 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin


Gene co-expression network
sample Sobic001G416300 Sobic001G416300 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G427700 Sobic001G427700 Sobic001G416300--Sobic001G427700 Sobic004G018400 Sobic004G018400 Sobic001G416300--Sobic004G018400 Sobic009G190800 Sobic009G190800 Sobic001G416300--Sobic009G190800 Sobic003G402200 Sobic003G402200 Sobic001G416300--Sobic003G402200 Sobic005G089000 Sobic005G089000 Sobic001G416300--Sobic005G089000 Sobic008G142600 Sobic008G142600 Sobic001G416300--Sobic008G142600 Sobic006G170200--Sobic001G416300 Sobic004G117800 Sobic004G117800 Sobic006G170200--Sobic004G117800 Sobic004G268100 Sobic004G268100 Sobic006G170200--Sobic004G268100 Sobic006G170200--Sobic003G402200 Sobic009G029700 Sobic009G029700 Sobic006G170200--Sobic009G029700 Sobic001G202500 Sobic001G202500 Sobic006G170200--Sobic001G202500 Sobic002G281800 Sobic002G281800 Sobic006G170200--Sobic002G281800 Sobic009G000900 Sobic009G000900 Sobic006G170200--Sobic009G000900 Sobic009G152400 Sobic009G152400 Sobic006G170200--Sobic009G152400 Sobic002G038300 Sobic002G038300 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic002G386400 Sobic002G386400 Sobic001G161300--Sobic002G386400 Sobic004G068700 Sobic004G068700 Sobic001G161300--Sobic004G068700 Sobic001G276100 Sobic001G276100 Sobic001G161300--Sobic001G276100 Sobic001G161300--Sobic002G226100 Sobic002G384400 Sobic002G384400 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic001G161300--Sobic009G000900 Sobic002G226100--Sobic001G161300 Sobic002G226100--Sobic004G068700 Sobic002G226100--Sobic002G386400 Sobic002G226100--Sobic002G384400 Sobic002G226100--Sobic001G276100 Sobic002G226100--Sobic001G416300 Sobic001G179100 Sobic001G179100 Sobic002G226100--Sobic001G179100 Sobic006G197700 Sobic006G197700 Sobic002G226100--Sobic006G197700 Sobic008G111300 Sobic008G111300 Sobic002G226100--Sobic008G111300 Sobic001G427700--Sobic008G142600 Sobic001G427700--Sobic003G402200 Sobic001G427700--Sobic004G018400 Sobic001G320700 Sobic001G320700 Sobic001G427700--Sobic001G320700 Sobic001G427700--Sobic001G416300 Sobic003G213900 Sobic003G213900 Sobic001G427700--Sobic003G213900 Sobic001G315800 Sobic001G315800 Sobic001G427700--Sobic001G315800 Sobic004G217700 Sobic004G217700 Sobic001G427700--Sobic004G217700 Sobic010G214200 Sobic010G214200 Sobic001G427700--Sobic010G214200 Sobic004G018400--Sobic001G427700 Sobic003G003000 Sobic003G003000 Sobic004G018400--Sobic003G003000 Sobic004G018400--Sobic001G416300 Sobic010G094800 Sobic010G094800 Sobic004G018400--Sobic010G094800 Sobic004G018400--Sobic001G320700 Sobic004G018400--Sobic003G402200 Sobic002G117200 Sobic002G117200 Sobic004G018400--Sobic002G117200 Sobic004G018400--Sobic009G190800 Sobic004G018400--Sobic001G315800 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic003G359900 Sobic003G359900 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic004G214100 Sobic004G214100 Sobic009G190800--Sobic004G214100 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic009G190800--Sobic001G416300 Sobic007G168200 Sobic007G168200 Sobic009G190800--Sobic007G168200 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic003G402200--Sobic009G205600 Sobic004G078600 Sobic004G078600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic003G402200--Sobic001G320700 Sobic001G201800 Sobic001G201800 Sobic003G402200--Sobic001G201800 Sobic003G402200--Sobic001G427700 Sobic003G402200--Sobic005G089000 Sobic003G402200--Sobic008G111300 Sobic002G195700 Sobic002G195700 Sobic005G089000--Sobic002G195700 Sobic001G321600 Sobic001G321600 Sobic005G089000--Sobic001G321600 Sobic008G073400 Sobic008G073400 Sobic005G089000--Sobic008G073400 Sobic001G019300 Sobic001G019300 Sobic005G089000--Sobic001G019300 Sobic001G005500 Sobic001G005500 Sobic005G089000--Sobic001G005500 Sobic003G135800 Sobic003G135800 Sobic005G089000--Sobic003G135800 Sobic003G291400 Sobic003G291400 Sobic005G089000--Sobic003G291400 Sobic003G106500 Sobic003G106500 Sobic005G089000--Sobic003G106500 Sobic001G452700 Sobic001G452700 Sobic005G089000--Sobic001G452700 Sobic008G142600--Sobic001G427700 Sobic002G271600 Sobic002G271600 Sobic008G142600--Sobic002G271600 Sobic008G142600--Sobic003G402200 Sobic008G142600--Sobic001G321600 Sobic008G142600--Sobic001G022600 Sobic008G142600--Sobic001G416300 Sobic008G142600--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic008G142600--Sobic002G366100 Sobic008G142600--Sobic009G190800
Octagon: transcription factors


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