Gene annotation
Transcriptome id Sobic.004G018400.1
Synonym Sb04g001740
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5XT06
Pfam PF00160
Panther DB PTHR11071
NCBI CDD KOG0865; Cyclophilin type peptidyl-prolyl cis-trans isomerase
KEGG Orthology K01802; peptidylprolyl isomerase
Gene Ontology GO:0006457; protein folding GO:0003755peptidyl-prolyl cis-trans isomerase activity GO:0000413protein peptidyl-prolyl isomerization


Orthologs (automatic annotation)
TAIR AT2G21130 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os02g02890.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a045103 , Zm00025a031445 , Zm00025a020506 , Zm00025a020505 , Zm00025a013433
Brachypodium KQJ91642 , KQJ92978 , KQJ92979
Barley HORVU6Hr1G012570.3 , HORVU4Hr1G000910.1 , HORVU4Hr1G000910.2 , HORVU4Hr1G000910.3 , HORVU6Hr1G012570.4 , HORVU6Hr1G012570.2 , HORVU6Hr1G012570.1 , HORVU6Hr1G092950.1
Wheat TraesCS4A02G312600 , TraesCS6B02G093100
Populus -


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cDNA sequences
Sobic.004G018400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G427700 anthranilate synthase component I-1, chloroplast precursor, putative, expressed K01657: anthranilate synthase component I
2 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
3 Sobic.001G416300 expressed protein -
4 Sobic.010G094800 pro-resilin precursor, putative, expressed -
5 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
6 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
7 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
8 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
9 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
10 Sobic.006G127400 inactive receptor kinase At1g27190 precursor, putative, expressed -
11 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
12 Sobic.006G170200 amino acid kinase, putative, expressed K00930: acetylglutamate kinase
13 Sobic.001G081400 ankyrin repeat domain containing protein, putative, expressed K18477: type IV protein arginine methyltransferase
14 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
15 Sobic.001G198200 CRP3 - Cysteine-rich family protein precursor, expressed -
16 Sobic.006G052200 nodulin, putative, expressed -
17 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.001G008800 expressed protein -
19 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
20 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G018400 Sobic004G018400 Sobic001G427700 Sobic001G427700 Sobic004G018400--Sobic001G427700 Sobic003G003000 Sobic003G003000 Sobic004G018400--Sobic003G003000 Sobic001G416300 Sobic001G416300 Sobic004G018400--Sobic001G416300 Sobic010G094800 Sobic010G094800 Sobic004G018400--Sobic010G094800 Sobic001G320700 Sobic001G320700 Sobic004G018400--Sobic001G320700 Sobic003G402200 Sobic003G402200 Sobic004G018400--Sobic003G402200 Sobic002G117200 Sobic002G117200 Sobic004G018400--Sobic002G117200 Sobic009G190800 Sobic009G190800 Sobic004G018400--Sobic009G190800 Sobic001G315800 Sobic001G315800 Sobic004G018400--Sobic001G315800 Sobic008G142600 Sobic008G142600 Sobic001G427700--Sobic008G142600 Sobic001G427700--Sobic003G402200 Sobic001G427700--Sobic004G018400 Sobic001G427700--Sobic001G320700 Sobic001G427700--Sobic001G416300 Sobic003G213900 Sobic003G213900 Sobic001G427700--Sobic003G213900 Sobic001G427700--Sobic001G315800 Sobic004G217700 Sobic004G217700 Sobic001G427700--Sobic004G217700 Sobic010G214200 Sobic010G214200 Sobic001G427700--Sobic010G214200 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic003G003000--Sobic004G018400 Sobic003G003000--Sobic002G117200 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic006G170200 Sobic006G170200 Sobic001G416300--Sobic006G170200 Sobic001G161300 Sobic001G161300 Sobic001G416300--Sobic001G161300 Sobic002G226100 Sobic002G226100 Sobic001G416300--Sobic002G226100 Sobic001G416300--Sobic001G427700 Sobic001G416300--Sobic004G018400 Sobic001G416300--Sobic009G190800 Sobic001G416300--Sobic003G402200 Sobic005G089000 Sobic005G089000 Sobic001G416300--Sobic005G089000 Sobic001G416300--Sobic008G142600 Sobic010G094800--Sobic003G003000 Sobic010G094800--Sobic004G018400 Sobic001G125900 Sobic001G125900 Sobic010G094800--Sobic001G125900 Sobic010G094800--Sobic006G281200 Sobic002G241500 Sobic002G241500 Sobic010G094800--Sobic002G241500 Sobic003G325500 Sobic003G325500 Sobic010G094800--Sobic003G325500 Sobic006G103900 Sobic006G103900 Sobic010G094800--Sobic006G103900 Sobic001G128100 Sobic001G128100 Sobic010G094800--Sobic001G128100 Sobic001G081400 Sobic001G081400 Sobic010G094800--Sobic001G081400 Sobic003G214000 Sobic003G214000 Sobic001G320700--Sobic003G214000 Sobic001G320700--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic001G320700--Sobic001G201800 Sobic002G423600 Sobic002G423600 Sobic001G320700--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic001G320700--Sobic004G078600 Sobic001G320700--Sobic010G214200 Sobic006G045000 Sobic006G045000 Sobic001G320700--Sobic006G045000 Sobic001G320700--Sobic003G402200 Sobic003G248901 Sobic003G248901 Sobic001G320700--Sobic003G248901 Sobic001G145050 Sobic001G145050 Sobic003G402200--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic003G402200--Sobic009G205600 Sobic003G402200--Sobic004G078600 Sobic003G151800 Sobic003G151800 Sobic003G402200--Sobic003G151800 Sobic003G402200--Sobic001G320700 Sobic003G402200--Sobic001G201800 Sobic003G402200--Sobic001G427700 Sobic003G402200--Sobic005G089000 Sobic008G111300 Sobic008G111300 Sobic003G402200--Sobic008G111300 Sobic009G156300 Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic002G117200--Sobic004G352900 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic009G190800--Sobic001G022600 Sobic003G359900 Sobic003G359900 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic004G214100 Sobic004G214100 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic009G190800--Sobic001G416300 Sobic007G168200 Sobic007G168200 Sobic009G190800--Sobic007G168200 Sobic001G315800--Sobic001G201800 Sobic001G315800--Sobic004G078600 Sobic004G209500 Sobic004G209500 Sobic001G315800--Sobic004G209500 Sobic001G315800--Sobic006G045000 Sobic005G085500 Sobic005G085500 Sobic001G315800--Sobic005G085500 Sobic002G209100 Sobic002G209100 Sobic001G315800--Sobic002G209100 Sobic002G349400 Sobic002G349400 Sobic001G315800--Sobic002G349400 Sobic001G315800--Sobic002G423600 Sobic004G195800 Sobic004G195800 Sobic001G315800--Sobic004G195800
Octagon: transcription factors


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