Gene annotation
Transcriptome id Sobic.001G081400.1
Synonym
Functional annotation ankyrin repeat domain containing protein, putative, expressed
UniProt A0A097PRY8 , A0A1B6QHV7
Pfam PF13637
Panther DB PTHR32379 PTHR32379:SF1
NCBI CDD KOG1709; Guanidinoacetate methyltransferase and related proteins
KEGG Orthology K18477; type IV protein arginine methyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65860 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os03g55330.1 : ankyrin repeat domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008255 , Zm00025a016749
Brachypodium KQK13074
Barley HORVU5Hr1G097100.4 , HORVU5Hr1G097100.2
Wheat TraesCS5D02G408600 , TraesCS5B02G404100 , TraesCS5B02G404100 , TraesCS5A02G399000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034400 RNA recognition motif containing protein, putative, expressed -
2 Sobic.003G310600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial glycoprotein, putative, expressed -
3 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
4 Sobic.008G094600 - -
5 Sobic.001G069400 expressed protein -
6 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
7 Sobic.003G244300 C2 domain containing protein, putative, expressed -
8 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
9 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
10 Sobic.010G029400 peptidase, T1 family, putative, expressed K02738: 20S proteasome subunit beta 1
11 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
12 Sobic.007G022500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
13 Sobic.006G108600 prohibitin, putative, expressed K17080: prohibitin 1
14 Sobic.010G171501 - -
15 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
16 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
17 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
18 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
19 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
20 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic001G081400 Sobic001G081400 Sobic007G034400 Sobic007G034400 Sobic001G081400--Sobic007G034400 Sobic003G310600 Sobic003G310600 Sobic001G081400--Sobic003G310600 Sobic002G353500 Sobic002G353500 Sobic001G081400--Sobic002G353500 Sobic008G094600 Sobic008G094600 Sobic001G081400--Sobic008G094600 Sobic001G069400 Sobic001G069400 Sobic001G081400--Sobic001G069400 Sobic001G202400 Sobic001G202400 Sobic001G081400--Sobic001G202400 Sobic003G244300 Sobic003G244300 Sobic001G081400--Sobic003G244300 Sobic003G015400 Sobic003G015400 Sobic001G081400--Sobic003G015400 Sobic008G103900 Sobic008G103900 Sobic001G081400--Sobic008G103900 Sobic009G114400 Sobic009G114400 Sobic007G034400--Sobic009G114400 Sobic005G164700 Sobic005G164700 Sobic007G034400--Sobic005G164700 Sobic007G034400--Sobic008G103900 Sobic007G034400--Sobic003G015400 Sobic001G058900 Sobic001G058900 Sobic007G034400--Sobic001G058900 Sobic003G025200 Sobic003G025200 Sobic007G034400--Sobic003G025200 Sobic001G225700 Sobic001G225700 Sobic007G034400--Sobic001G225700 Sobic001G510800 Sobic001G510800 Sobic007G034400--Sobic001G510800 Sobic002G045100 Sobic002G045100 Sobic007G034400--Sobic002G045100 Sobic003G310600--Sobic001G081400 Sobic003G310600--Sobic003G244300 Sobic001G371100 Sobic001G371100 Sobic003G310600--Sobic001G371100 Sobic004G047500 Sobic004G047500 Sobic003G310600--Sobic004G047500 Sobic001G018200 Sobic001G018200 Sobic003G310600--Sobic001G018200 Sobic006G108600 Sobic006G108600 Sobic003G310600--Sobic006G108600 Sobic008G113700 Sobic008G113700 Sobic003G310600--Sobic008G113700 Sobic001G107300 Sobic001G107300 Sobic003G310600--Sobic001G107300 Sobic003G310600--Sobic005G164700 Sobic002G353500--Sobic001G107300 Sobic001G040300 Sobic001G040300 Sobic002G353500--Sobic001G040300 Sobic002G353500--Sobic001G081400 Sobic007G022500 Sobic007G022500 Sobic002G353500--Sobic007G022500 Sobic002G353500--Sobic006G108600 Sobic001G349400 Sobic001G349400 Sobic002G353500--Sobic001G349400 Sobic001G544100 Sobic001G544100 Sobic002G353500--Sobic001G544100 Sobic004G343600 Sobic004G343600 Sobic002G353500--Sobic004G343600 Sobic009G052500 Sobic009G052500 Sobic002G353500--Sobic009G052500 Sobic008G098800 Sobic008G098800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic008G094600--Sobic001G058900 Sobic003G129800 Sobic003G129800 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G100000 Sobic008G100000 Sobic008G094600--Sobic008G100000 Sobic001G513500 Sobic001G513500 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300 Sobic001G069400--Sobic003G025200 Sobic010G029400 Sobic010G029400 Sobic001G069400--Sobic010G029400 Sobic010G038700 Sobic010G038700 Sobic001G069400--Sobic010G038700 Sobic001G069400--Sobic001G058900 Sobic008G127500 Sobic008G127500 Sobic001G069400--Sobic008G127500 Sobic002G078400 Sobic002G078400 Sobic001G069400--Sobic002G078400 Sobic001G069400--Sobic008G094600 Sobic005G157200 Sobic005G157200 Sobic001G069400--Sobic005G157200 Sobic001G069400--Sobic008G100000 Sobic001G202400--Sobic003G015400 Sobic001G202400--Sobic007G034400 Sobic001G202400--Sobic008G103900 Sobic001G543300 Sobic001G543300 Sobic001G202400--Sobic001G543300 Sobic001G202400--Sobic001G081400 Sobic009G207100 Sobic009G207100 Sobic001G202400--Sobic009G207100 Sobic002G007100 Sobic002G007100 Sobic001G202400--Sobic002G007100 Sobic003G182400 Sobic003G182400 Sobic001G202400--Sobic003G182400 Sobic009G168000 Sobic009G168000 Sobic001G202400--Sobic009G168000 Sobic004G325200 Sobic004G325200 Sobic003G244300--Sobic004G325200 Sobic003G244300--Sobic008G094600 Sobic004G247200 Sobic004G247200 Sobic003G244300--Sobic004G247200 Sobic003G244300--Sobic008G100000 Sobic003G244300--Sobic008G098800 Sobic010G230700 Sobic010G230700 Sobic003G244300--Sobic010G230700 Sobic002G372400 Sobic002G372400 Sobic003G244300--Sobic002G372400 Sobic006G201500 Sobic006G201500 Sobic003G244300--Sobic006G201500 Sobic005G019700 Sobic005G019700 Sobic003G244300--Sobic005G019700 Sobic003G015400--Sobic007G034400 Sobic008G021100 Sobic008G021100 Sobic003G015400--Sobic008G021100 Sobic010G005300 Sobic010G005300 Sobic003G015400--Sobic010G005300 Sobic003G015400--Sobic001G202400 Sobic004G293100 Sobic004G293100 Sobic003G015400--Sobic004G293100 Sobic003G015400--Sobic001G510800 Sobic006G281200 Sobic006G281200 Sobic003G015400--Sobic006G281200 Sobic003G015400--Sobic001G058900 Sobic009G062000 Sobic009G062000 Sobic003G015400--Sobic009G062000 Sobic008G103900--Sobic007G034400 Sobic010G013900 Sobic010G013900 Sobic008G103900--Sobic010G013900 Sobic008G103900--Sobic001G202400 Sobic004G248900 Sobic004G248900 Sobic008G103900--Sobic004G248900 Sobic009G130400 Sobic009G130400 Sobic008G103900--Sobic009G130400 Sobic002G179000 Sobic002G179000 Sobic008G103900--Sobic002G179000 Sobic010G018000 Sobic010G018000 Sobic008G103900--Sobic010G018000 Sobic008G103900--Sobic003G015400 Sobic007G143000 Sobic007G143000 Sobic008G103900--Sobic007G143000
Octagon: transcription factors


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