Gene annotation
Transcriptome id Sobic.007G022500.1
Synonym EIF3G1, ATEIF3G1, Sb07g001980
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt C5YMH0
Pfam PF00076 PF12353
Panther DB PTHR10352
NCBI CDD KOG0122; Translation initiation factor 3, subunit g (eIF-3g)
KEGG Orthology K03248; translation initiation factor 3 subunit G
Gene Ontology GO:0003676; nucleic acid binding GO:0005852eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT3G11400 : eukaryotic translation initiation factor 3G1
RAP-DB (Rice) LOC_Os02g54700.2 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a030222
Brachypodium KQK01073
Barley HORVU6Hr1G083650.1 , HORVU6Hr1G083650.2 , HORVU6Hr1G083650.3
Wheat TraesCS6B02G381600 , TraesCS5A02G406900 , TraesCS6D02G331000 , TraesCS4D02G064800 , TraesCS4B02G065700 , TraesCS6A02G348000
Populus -


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cDNA sequences
Sobic.007G022500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G094600 - -
2 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
3 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
4 Sobic.009G191200 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
5 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
6 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
7 Sobic.006G108600 prohibitin, putative, expressed K17080: prohibitin 1
8 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
9 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
10 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
11 Sobic.006G143500 expressed protein -
12 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
13 Sobic.002G254650 - -
14 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
15 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
16 Sobic.009G001900 expressed protein -
17 Sobic.008G021100 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
18 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
19 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
20 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4


Gene co-expression network
sample Sobic007G022500 Sobic007G022500 Sobic008G094600 Sobic008G094600 Sobic007G022500--Sobic008G094600 Sobic004G032000 Sobic004G032000 Sobic007G022500--Sobic004G032000 Sobic001G517600 Sobic001G517600 Sobic007G022500--Sobic001G517600 Sobic009G191200 Sobic009G191200 Sobic007G022500--Sobic009G191200 Sobic008G098800 Sobic008G098800 Sobic007G022500--Sobic008G098800 Sobic002G044000 Sobic002G044000 Sobic007G022500--Sobic002G044000 Sobic006G108600 Sobic006G108600 Sobic007G022500--Sobic006G108600 Sobic004G137900 Sobic004G137900 Sobic007G022500--Sobic004G137900 Sobic003G358300 Sobic003G358300 Sobic007G022500--Sobic003G358300 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic001G058900 Sobic001G058900 Sobic008G094600--Sobic001G058900 Sobic003G129800 Sobic003G129800 Sobic008G094600--Sobic003G129800 Sobic009G223300 Sobic009G223300 Sobic008G094600--Sobic009G223300 Sobic008G094600--Sobic001G517600 Sobic008G100000 Sobic008G100000 Sobic008G094600--Sobic008G100000 Sobic001G513500 Sobic001G513500 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300 Sobic004G032000--Sobic001G517600 Sobic004G032000--Sobic003G129800 Sobic005G111100 Sobic005G111100 Sobic004G032000--Sobic005G111100 Sobic001G128400 Sobic001G128400 Sobic004G032000--Sobic001G128400 Sobic004G032000--Sobic009G223300 Sobic004G032000--Sobic009G191200 Sobic008G135000 Sobic008G135000 Sobic004G032000--Sobic008G135000 Sobic003G109600 Sobic003G109600 Sobic004G032000--Sobic003G109600 Sobic005G050500 Sobic005G050500 Sobic004G032000--Sobic005G050500 Sobic001G436200 Sobic001G436200 Sobic001G517600--Sobic001G436200 Sobic002G373800 Sobic002G373800 Sobic001G517600--Sobic002G373800 Sobic001G517600--Sobic003G109600 Sobic001G517600--Sobic004G032000 Sobic002G406500 Sobic002G406500 Sobic001G517600--Sobic002G406500 Sobic001G517600--Sobic005G050500 Sobic002G379500 Sobic002G379500 Sobic001G517600--Sobic002G379500 Sobic001G517600--Sobic008G098800 Sobic006G138100 Sobic006G138100 Sobic001G517600--Sobic006G138100 Sobic009G233400 Sobic009G233400 Sobic009G191200--Sobic009G233400 Sobic009G191200--Sobic008G135000 Sobic001G334300 Sobic001G334300 Sobic009G191200--Sobic001G334300 Sobic009G191200--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic009G191200--Sobic002G115000 Sobic002G049300 Sobic002G049300 Sobic009G191200--Sobic002G049300 Sobic003G280700 Sobic003G280700 Sobic009G191200--Sobic003G280700 Sobic001G085400 Sobic001G085400 Sobic009G191200--Sobic001G085400 Sobic002G304900 Sobic002G304900 Sobic009G191200--Sobic002G304900 Sobic008G098800--Sobic001G058900 Sobic008G098800--Sobic002G049300 Sobic008G098800--Sobic009G233400 Sobic010G069400 Sobic010G069400 Sobic008G098800--Sobic010G069400 Sobic006G201500 Sobic006G201500 Sobic008G098800--Sobic006G201500 Sobic008G098800--Sobic002G304900 Sobic001G377800 Sobic001G377800 Sobic008G098800--Sobic001G377800 Sobic008G098800--Sobic005G050500 Sobic008G098800--Sobic003G280700 Sobic009G201800 Sobic009G201800 Sobic002G044000--Sobic009G201800 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic001G285300 Sobic001G285300 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic002G044000--Sobic004G032000 Sobic001G126200 Sobic001G126200 Sobic002G044000--Sobic001G126200 Sobic007G152400 Sobic007G152400 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic007G029400 Sobic007G029400 Sobic006G108600--Sobic007G029400 Sobic010G054200 Sobic010G054200 Sobic006G108600--Sobic010G054200 Sobic006G108600--Sobic008G135000 Sobic010G005300 Sobic010G005300 Sobic006G108600--Sobic010G005300 Sobic010G076400 Sobic010G076400 Sobic006G108600--Sobic010G076400 Sobic006G108600--Sobic008G094600 Sobic001G162800 Sobic001G162800 Sobic006G108600--Sobic001G162800 Sobic006G108600--Sobic009G233400 Sobic006G108600--Sobic004G032000 Sobic004G012800 Sobic004G012800 Sobic004G137900--Sobic004G012800 Sobic006G231700 Sobic006G231700 Sobic004G137900--Sobic006G231700 Sobic004G137900--Sobic003G358300 Sobic006G013900 Sobic006G013900 Sobic004G137900--Sobic006G013900 Sobic002G331300 Sobic002G331300 Sobic004G137900--Sobic002G331300 Sobic004G137900--Sobic001G286300 Sobic009G120100 Sobic009G120100 Sobic004G137900--Sobic009G120100 Sobic004G137900--Sobic003G129800 Sobic004G137900--Sobic005G111100 Sobic001G066700 Sobic001G066700 Sobic003G358300--Sobic001G066700 Sobic003G358300--Sobic006G231700 Sobic003G358300--Sobic005G111100 Sobic003G358300--Sobic002G044000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic003G358300--Sobic009G191200
Octagon: transcription factors


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