Gene annotation
Transcriptome id Sobic.006G108600.1
Synonym ATPHB3, Sb06g019110, PHB3
Functional annotation prohibitin, putative, expressed
UniProt C5Y9W6
Pfam PF01145
Panther DB PTHR23222 PTHR23222:SF3
NCBI CDD KOG3083; Prohibitin
KEGG Orthology K17080; prohibitin 1
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G40770 : prohibitin 3
RAP-DB (Rice) LOC_Os02g37000.1 : mitochondrial prohibitin complex protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a020835 , Zm00025a056226
Brachypodium KQK00047 , KQJ83000
Barley HORVU6Hr1G047300.2 , HORVU6Hr1G047300.1
Wheat TraesCS6A02G198500 , TraesCS6D02G185000
Populus -


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cDNA sequences
Sobic.006G108600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G029400 60S acidic ribosomal protein P0, putative, expressed K02941: RP-LP0, large subunit ribosomal protein LP0
2 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
3 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
4 Sobic.010G005300 ribosomal protein L6, putative, expressed K02940: RP-L9e, large subunit ribosomal protein L9e
5 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
6 Sobic.008G094600 - -
7 Sobic.001G162800 expressed protein -
8 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
9 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
10 Sobic.009G223300 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein
11 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
12 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
13 Sobic.004G325200 60S ribosome subunit biogenesis protein NIP7, putative, expressed K07565: 60S ribosome subunit biogenesis protein NIP7
14 Sobic.003G109600 40S ribosomal protein S5, putative, expressed K02989: RP-S5e, small subunit ribosomal protein S5e
15 Sobic.001G039400 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
16 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
17 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
18 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
19 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
20 Sobic.001G225700 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e


Gene co-expression network
sample Sobic006G108600 Sobic006G108600 Sobic007G029400 Sobic007G029400 Sobic006G108600--Sobic007G029400 Sobic010G054200 Sobic010G054200 Sobic006G108600--Sobic010G054200 Sobic008G135000 Sobic008G135000 Sobic006G108600--Sobic008G135000 Sobic010G005300 Sobic010G005300 Sobic006G108600--Sobic010G005300 Sobic010G076400 Sobic010G076400 Sobic006G108600--Sobic010G076400 Sobic008G094600 Sobic008G094600 Sobic006G108600--Sobic008G094600 Sobic001G162800 Sobic001G162800 Sobic006G108600--Sobic001G162800 Sobic009G233400 Sobic009G233400 Sobic006G108600--Sobic009G233400 Sobic004G032000 Sobic004G032000 Sobic006G108600--Sobic004G032000 Sobic005G050500 Sobic005G050500 Sobic007G029400--Sobic005G050500 Sobic001G039400 Sobic001G039400 Sobic007G029400--Sobic001G039400 Sobic009G179100 Sobic009G179100 Sobic007G029400--Sobic009G179100 Sobic003G109600 Sobic003G109600 Sobic007G029400--Sobic003G109600 Sobic002G304900 Sobic002G304900 Sobic007G029400--Sobic002G304900 Sobic007G029400--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic007G029400--Sobic009G223300 Sobic010G069400 Sobic010G069400 Sobic007G029400--Sobic010G069400 Sobic004G349700 Sobic004G349700 Sobic007G029400--Sobic004G349700 Sobic006G081100 Sobic006G081100 Sobic010G054200--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic010G054200--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic010G054200--Sobic001G058900 Sobic010G054200--Sobic009G223300 Sobic003G129800 Sobic003G129800 Sobic010G054200--Sobic003G129800 Sobic001G225700 Sobic001G225700 Sobic010G054200--Sobic001G225700 Sobic010G054200--Sobic009G233400 Sobic003G150000 Sobic003G150000 Sobic010G054200--Sobic003G150000 Sobic002G372400 Sobic002G372400 Sobic010G054200--Sobic002G372400 Sobic008G135000--Sobic001G058900 Sobic008G135000--Sobic009G233400 Sobic008G135000--Sobic002G304900 Sobic002G115000 Sobic002G115000 Sobic008G135000--Sobic002G115000 Sobic001G057300 Sobic001G057300 Sobic008G135000--Sobic001G057300 Sobic009G191200 Sobic009G191200 Sobic008G135000--Sobic009G191200 Sobic001G334300 Sobic001G334300 Sobic008G135000--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic008G135000--Sobic001G085400 Sobic008G135000--Sobic010G069400 Sobic001G510800 Sobic001G510800 Sobic010G005300--Sobic001G510800 Sobic010G005300--Sobic001G058900 Sobic002G415500 Sobic002G415500 Sobic010G005300--Sobic002G415500 Sobic010G005300--Sobic009G233400 Sobic008G100000 Sobic008G100000 Sobic010G005300--Sobic008G100000 Sobic010G005300--Sobic001G039400 Sobic010G005300--Sobic008G135000 Sobic010G005300--Sobic002G304900 Sobic010G005300--Sobic001G225700 Sobic010G076400--Sobic002G372400 Sobic010G076400--Sobic009G223300 Sobic003G078200 Sobic003G078200 Sobic010G076400--Sobic003G078200 Sobic009G054800 Sobic009G054800 Sobic010G076400--Sobic009G054800 Sobic009G173500 Sobic009G173500 Sobic010G076400--Sobic009G173500 Sobic010G076400--Sobic009G233400 Sobic010G076400--Sobic003G109600 Sobic004G198400 Sobic004G198400 Sobic010G076400--Sobic004G198400 Sobic002G379500 Sobic002G379500 Sobic010G076400--Sobic002G379500 Sobic008G098800 Sobic008G098800 Sobic008G094600--Sobic008G098800 Sobic002G135200 Sobic002G135200 Sobic008G094600--Sobic002G135200 Sobic008G094600--Sobic001G058900 Sobic008G094600--Sobic003G129800 Sobic008G094600--Sobic009G223300 Sobic001G517600 Sobic001G517600 Sobic008G094600--Sobic001G517600 Sobic008G094600--Sobic008G100000 Sobic001G513500 Sobic001G513500 Sobic008G094600--Sobic001G513500 Sobic001G286300 Sobic001G286300 Sobic008G094600--Sobic001G286300 Sobic001G347901 Sobic001G347901 Sobic001G162800--Sobic001G347901 Sobic001G162800--Sobic009G233400 Sobic001G162800--Sobic006G108600 Sobic006G013900 Sobic006G013900 Sobic001G162800--Sobic006G013900 Sobic002G054000 Sobic002G054000 Sobic001G162800--Sobic002G054000 Sobic001G162800--Sobic009G173500 Sobic001G162800--Sobic008G135000 Sobic001G162800--Sobic010G076400 Sobic004G342400 Sobic004G342400 Sobic001G162800--Sobic004G342400 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic009G233400--Sobic010G069400 Sobic009G233400--Sobic001G039400 Sobic009G233400--Sobic005G050500 Sobic009G233400--Sobic001G058900 Sobic009G233400--Sobic003G249700 Sobic009G233400--Sobic003G109600 Sobic009G233400--Sobic001G085400 Sobic004G032000--Sobic001G517600 Sobic004G032000--Sobic003G129800 Sobic005G111100 Sobic005G111100 Sobic004G032000--Sobic005G111100 Sobic001G128400 Sobic001G128400 Sobic004G032000--Sobic001G128400 Sobic004G032000--Sobic009G223300 Sobic004G032000--Sobic009G191200 Sobic004G032000--Sobic008G135000 Sobic004G032000--Sobic003G109600 Sobic004G032000--Sobic005G050500
Octagon: transcription factors


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