Gene annotation
Transcriptome id Sobic.009G233700.1,Sobic.009G233700.2
Synonym PSKF109, UREG, Sb09g028620
Functional annotation CobW/P47K family protein, putative, expressed
UniProt A0A1B6P9Z7 , A0A1B6PAA3
Pfam PF02492
Panther DB PTHR31715
NCBI CDD -
KEGG Orthology K03189; urease accessory protein
Gene Ontology GO:0016151; nickel cation binding GO:0006807nitrogen compound metabolic process GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT2G34470 : urease accessory protein G
RAP-DB (Rice) LOC_Os05g49050.1 : CobW/P47K family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036616
Brachypodium KQK04855
Barley -
Wheat TraesCS1B02G428800
Populus -


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cDNA sequences
Sobic.009G233700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081400 ankyrin repeat domain containing protein, putative, expressed K18477: type IV protein arginine methyltransferase
2 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
3 Sobic.003G098200 expressed protein -
4 Sobic.001G132900 expressed protein -
5 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
6 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
7 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
8 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
9 Sobic.009G065200 zinc finger family protein, putative, expressed -
10 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
11 Sobic.008G080000 leucine-rich repeat family protein, putative, expressed -
12 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
13 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
14 Sobic.009G209100 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
15 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
16 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
17 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
18 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
19 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
20 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G233700 Sobic009G233700 Sobic001G081400 Sobic001G081400 Sobic009G233700--Sobic001G081400 Sobic002G117200 Sobic002G117200 Sobic009G233700--Sobic002G117200 Sobic003G098200 Sobic003G098200 Sobic009G233700--Sobic003G098200 Sobic001G132900 Sobic001G132900 Sobic009G233700--Sobic001G132900 Sobic001G136500 Sobic001G136500 Sobic009G233700--Sobic001G136500 Sobic002G353500 Sobic002G353500 Sobic009G233700--Sobic002G353500 Sobic001G188700 Sobic001G188700 Sobic009G233700--Sobic001G188700 Sobic004G018400 Sobic004G018400 Sobic009G233700--Sobic004G018400 Sobic009G065200 Sobic009G065200 Sobic009G233700--Sobic009G065200 Sobic007G034400 Sobic007G034400 Sobic001G081400--Sobic007G034400 Sobic003G310600 Sobic003G310600 Sobic001G081400--Sobic003G310600 Sobic001G081400--Sobic002G353500 Sobic008G094600 Sobic008G094600 Sobic001G081400--Sobic008G094600 Sobic001G069400 Sobic001G069400 Sobic001G081400--Sobic001G069400 Sobic001G202400 Sobic001G202400 Sobic001G081400--Sobic001G202400 Sobic003G244300 Sobic003G244300 Sobic001G081400--Sobic003G244300 Sobic003G015400 Sobic003G015400 Sobic001G081400--Sobic003G015400 Sobic008G103900 Sobic008G103900 Sobic001G081400--Sobic008G103900 Sobic009G156300 Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic006G127500 Sobic006G127500 Sobic003G098200--Sobic006G127500 Sobic001G097400 Sobic001G097400 Sobic003G098200--Sobic001G097400 Sobic003G257200 Sobic003G257200 Sobic003G098200--Sobic003G257200 Sobic003G436600 Sobic003G436600 Sobic003G098200--Sobic003G436600 Sobic001G436300 Sobic001G436300 Sobic003G098200--Sobic001G436300 Sobic003G098200--Sobic009G233700 Sobic001G235700 Sobic001G235700 Sobic003G098200--Sobic001G235700 Sobic003G425100 Sobic003G425100 Sobic003G098200--Sobic003G425100 Sobic004G227100 Sobic004G227100 Sobic003G098200--Sobic004G227100 Sobic001G132900--Sobic003G003000 Sobic001G008800 Sobic001G008800 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic001G136500--Sobic001G132900 Sobic001G099800 Sobic001G099800 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic008G008300 Sobic008G008300 Sobic001G136500--Sobic008G008300 Sobic010G079800 Sobic010G079800 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic004G146200 Sobic004G146200 Sobic001G136500--Sobic004G146200 Sobic008G125000 Sobic008G125000 Sobic001G136500--Sobic008G125000 Sobic004G206300 Sobic004G206300 Sobic001G136500--Sobic004G206300 Sobic001G107300 Sobic001G107300 Sobic002G353500--Sobic001G107300 Sobic001G040300 Sobic001G040300 Sobic002G353500--Sobic001G040300 Sobic002G353500--Sobic001G081400 Sobic007G022500 Sobic007G022500 Sobic002G353500--Sobic007G022500 Sobic006G108600 Sobic006G108600 Sobic002G353500--Sobic006G108600 Sobic001G349400 Sobic001G349400 Sobic002G353500--Sobic001G349400 Sobic001G544100 Sobic001G544100 Sobic002G353500--Sobic001G544100 Sobic004G343600 Sobic004G343600 Sobic002G353500--Sobic004G343600 Sobic009G052500 Sobic009G052500 Sobic002G353500--Sobic009G052500 Sobic005G110526 Sobic005G110526 Sobic001G188700--Sobic005G110526 Sobic004G018200 Sobic004G018200 Sobic001G188700--Sobic004G018200 Sobic006G094500 Sobic006G094500 Sobic001G188700--Sobic006G094500 Sobic009G187600 Sobic009G187600 Sobic001G188700--Sobic009G187600 Sobic007G031100 Sobic007G031100 Sobic001G188700--Sobic007G031100 Sobic001G188700--Sobic008G125000 Sobic001G188700--Sobic001G132900 Sobic003G058900 Sobic003G058900 Sobic001G188700--Sobic003G058900 Sobic001G434400 Sobic001G434400 Sobic001G188700--Sobic001G434400 Sobic001G427700 Sobic001G427700 Sobic004G018400--Sobic001G427700 Sobic004G018400--Sobic003G003000 Sobic001G416300 Sobic001G416300 Sobic004G018400--Sobic001G416300 Sobic010G094800 Sobic010G094800 Sobic004G018400--Sobic010G094800 Sobic001G320700 Sobic001G320700 Sobic004G018400--Sobic001G320700 Sobic003G402200 Sobic003G402200 Sobic004G018400--Sobic003G402200 Sobic004G018400--Sobic002G117200 Sobic009G190800 Sobic009G190800 Sobic004G018400--Sobic009G190800 Sobic001G315800 Sobic001G315800 Sobic004G018400--Sobic001G315800 Sobic006G126200 Sobic006G126200 Sobic009G065200--Sobic006G126200 Sobic001G380500 Sobic001G380500 Sobic009G065200--Sobic001G380500 Sobic007G168200 Sobic007G168200 Sobic009G065200--Sobic007G168200 Sobic008G080000 Sobic008G080000 Sobic009G065200--Sobic008G080000 Sobic001G543300 Sobic001G543300 Sobic009G065200--Sobic001G543300 Sobic001G294200 Sobic001G294200 Sobic009G065200--Sobic001G294200 Sobic009G065200--Sobic008G103900 Sobic009G065200--Sobic001G202400 Sobic009G193850 Sobic009G193850 Sobic009G065200--Sobic009G193850
Octagon: transcription factors


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